LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl04g00119	ATGGATCCCGACGCCTTCTCGGCGAGTCTATTCAAGTGGGACCCACGGGGGGCGGCTCAACCCCCAAACCGCCTGCTCGAAGCGGTGGCGCCGACGCCTCCGTCGTACGCTATCCGACCGAGGGAACTCGGAGGACTAGAAGACTTCTTTCAGGCGTACGGTATCCGATACTACACGGCTGCGAAGATAGCTGAGTTAGGGTTCACGGTGAGCACACTTCTAGACATGAAGGACCAGGAGCTCGACGAGATGATGACCAGCCTCTCTCAGATCTTCAGGTGGGACCTACTCGTCGGAGAGAGGTACGGTATCAAGGCTGCCGTCCGGGCCGAGCGGAGACACCTCGAAGAGGAAGAGGCGAGGCGGCGCCACCTCCTTGCCGCAGACACAGCCAACGCTCTCGACGCACTCTCGCAAGAAGGTTTATCGGAGGAGCCGGTGCAACAAGAGAAGGAGGCGGCAGGGAGTGGTGGCGGAGGTGGTGGTGGTACGTGGGAGGTTGTAACCACACAGAAGAAGAAGCAACGGCGAAGGAAGTCGGTGACCAAGAGCGGAGATGACGACGATGATGAGGCGGCGGACGATGATAATGGTGGAGGTGGTGAGAGGCAGAGGGAACATCCGTTCATCGTGACGGAGCCCGGCGAGGTGGCTCGTGGCAAAAAGAACGGTCTCGATTACCTGTTCCATCTCTACGAACAGTGCCGTGATTTCTTGATCCAAGTTCAGAACATCGCCAAGGAGAGAGGTGAAAAGTGCCCCAACAAGGTGACGAATCAAGTGTTTAGGTACGCAAAGAAGGCGGGTGCAAGCTACATAAACAAGCCGAAAATGCGACACTATGTGCACTGCTACGCGTTGCACTGTCTCGACGAGGAGGTGTCAAATGCACTGAGGAGTTCTCTGAAGGAGAGAGGAGATAACGTGGGTGCATGGAGGCAGGCATGCTACAAACCCCTCGTTGCAATGGCAGCAAGACAAGGGTGGGACATCGACGCCGTCTTCAATGCTAACCCCCGCCTCGCCATCTGGTACGTACCCACCAAGCTCCGTCAGCTCTGCCATGCAGAACGCAGCAATGCTGCACAGGCAGCTGCTTCTAGCTCTACCTCTGGTGGGGCAATCACTGGCCCTTCATTCTAA	1143	0.5722	MDPDAFSASLFKWDPRGAAQPPNRLLEAVAPTPPSYAIRPRELGGLEDFFQAYGIRYYTAAKIAELGFTVSTLLDMKDQELDEMMTSLSQIFRWDLLVGERYGIKAAVRAERRHLEEEEARRRHLLAADTANALDALSQEGLSEEPVQQEKEAAGSGGGGGGGTWEVVTTQKKKQRRRKSVTKSGDDDDDEAADDDNGGGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPNKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNALRSSLKERGDNVGAWRQACYKPLVAMAARQGWDIDAVFNANPRLAIWYVPTKLRQLCHAERSNAAQAAASSSTSGGAITGPSF*	381

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl04g00119	380	Gene3D	Protein LEAFY	199	368	IPR038276	-
	Eupl04g00119	380	Pfam	DNA Binding Domain (C-terminal) Leafy/Floricaula	197	362	IPR035209	GO:0003677
	Eupl04g00119	380	Pfam	Floricaula / Leafy protein SAM domain	42	119	IPR035079	-
	Eupl04g00119	380	PANTHER	PROTEIN LEAFY	1	368	IPR002910	GO:0003677\|GO:0006355
	Eupl04g00119	380	MobiDBLite	consensus disorder prediction	141	215	-	-
	Eupl04g00119	380	MobiDBLite	consensus disorder prediction	197	212	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl04g00119	1	372	Orphan Transcription Factor Family	AT5G61850	63.942	1.65e-156	445

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LFY	Eupl04g00119		C_LFY_FLO	3.8e-107	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl04g00119	-		-	vvi:100252653	570.852