Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00090 ATGGCCATGGTTCATCCCGAGCTTGATCGGGTGATCCATGTGCCTATACCTACTTACGACCTAATTACGAGGATCAGTTTCAGCTGCTGTTACATTTCTATGCATGGTCAAGGCTGTAAGAGATTTGGGTTGTTACATTTATATTGGAAAGCAGCTGAAGAAATGCCAAGTGGCAATGGCACAAAGGAAGCTCCCTGGACATTCCCCAAGAATGGATACATGATTCCATTGGTCTCAGGCCCCATGCCTACGATAGCTGATGGAATTACTAGCTTTAGAAGATCTCTTGCAAGGACAAAATTGAGGTTATCAGTGAGATCTTCAATTCCTGATCCAGAAGAAACCCACCAACAGGTGCTTCCGAACGATATTGATTTGCTAAATCCTCCGGCTGAGCTTGAGAAGAAGAGGCACAAGCTCAAGCGTCTCGTGCAGTCGCCGAACTCCTTCTTCATGCATATTCTCACCTTCAGATGTGCTTGTTTCTCTTCTTCTGGCCAGTTTGAGAGATGGTCTGTGCAATGCTGCCCCATGATTCTCAAAAAGGCCATCGCCATGGCCATCATATTCCCCAAGACTATCATTAGATTCCTTCCACTTTTATTATCTGGTTAG 615 0.452 MAMVHPELDRVIHVPIPTYDLITRISFSCCYISMHGQGCKRFGLLHLYWKAAEEMPSGNGTKEAPWTFPKNGYMIPLVSGPMPTIADGITSFRRSLARTKLRLSVRSSIPDPEETHQQVLPNDIDLLNPPAELEKKRHKLKRLVQSPNSFFMHILTFRCACFSSSGQFERWSVQCCPMILKKAIAMAIIFPKTIIRFLPLLLSG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00090 204 Gene3D - 122 180 IPR023407 -
Eupl04g00090 204 PANTHER 40S RIBOSOMAL PROTEIN S27 113 152 IPR000592 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00090 Eupl-Chr4 1621404 1636028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00090 119 168 Cytoplasmic Ribosomal Protein Gene Family AT2G45710 68.627 1.19e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00090 K02978 - zof:121977368 68.1662