Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00042 ATGGGTAGGTTACCAAGTTTTTCCTTTGTGCTTTTTCTGGTTTCTCTTCTCACCTCTATGGACATGGGAGAATGCCAGCACGGCGACTGTCCGACCATAACCTGCAGTCCGGGCGGCCCTGAGGTTCGATTCCCCTTCCGAATAAAAGATCGGCAACCTCAGCACTGTGGTTATCCGGGGTTCGAGGTGGCTTGCAAGGCCAATAATACCGTGCTCCACCTCCCCTCATCTTCTGTAGGAGAAACCTTCTTCATCAGATCCATCTCTTACAGAGAACAGAGACTAAGCATTTTCGATCCCAACAATTGCGATGCCGCCCTCTTCTTCTATCTCAATCTCTCCTCTTCTCCTTTCCATTACGACTACTCTTCAACTTACAACTTCACATTCTTCGATTGCTCCATAGAGAATGATACCGACCTTTTGTATCAGCAAAAGATCCCTTGTATGAGCAGCTTGGGGAATTATATCATCGTTGATTACTCGTATAGTTACCTGGACGGGATGCCCTCGTCTTGCAAGTCAATGAAAACCGTTGCTGTTCCATGGAGGTACTATTATAGTTTGACGTCGGGCGGTGGTTCTGATATTTGTCTGGACTGGGATTTGCCCGGGTGCAAAGAATGCGAATTGGGAAGAGGGAAATGCGGATTCGGCAACATCACCACTCCTGAATTTGCATGTTACGATAAACCCCTCCATAGTAAAGGGATCGGTGGGCGCCGATGCCGATTCGGATCAGAGGGCGGATCGCTCGTCTCGGATCATCTCACTCGAAATGACGTGAGGGTTCTTCATGAACAGTGCATATCAGGCGAGACAACCCCATTTCAGATCATCTCGCTCAATCCAGAACCGGATGAGCGAGACTTTGAACCATGTGGGTTAGGGACTGTCCTGCAAAAGAGGAATTGCACCCATTATATGTTTGTTTTCTAA 939 0.4803 MGRLPSFSFVLFLVSLLTSMDMGECQHGDCPTITCSPGGPEVRFPFRIKDRQPQHCGYPGFEVACKANNTVLHLPSSSVGETFFIRSISYREQRLSIFDPNNCDAALFFYLNLSSSPFHYDYSSTYNFTFFDCSIENDTDLLYQQKIPCMSSLGNYIIVDYSYSYLDGMPSSCKSMKTVAVPWRYYYSLTSGGGSDICLDWDLPGCKECELGRGKCGFGNITTPEFACYDKPLHSKGIGGRRCRFGSEGGSLVSDHLTRNDVRVLHEQCISGETTPFQIISLNPEPDERDFEPCGLGTVLQKRNCTHYMFVF* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00042 312 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 238 IPR046948 -
Eupl04g00042 312 Pfam Wall-associated receptor kinase galacturonan-binding 30 99 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00042 Eupl-Chr4 929607 931438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00042 26 238 C3H Transcription Factor Family AT2G25410 32.432 5.17e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00042 - - ming:122090102 197.208