Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00041 ATGTCCGTGTTCTCAGTTATCCGCGCCACCTGCATGTGCATCGTCATGAGAAAGATGGGAAGTGTTGCATTCTACTTCATGTTCTTCTCTGTAGCAGCTGGCGACATCGTCATGGGAGAAGCATGCAGCTCTTATACGTCCTCCTGCGGAGATATTCACCTCATCAGCTACCCGTTTGGCTTAAAAGGCGACCCCAACAATTGTGGTGACCCTCAATACCAACTCGCTTGTGAGAGCAATCGAACAGTGTTGCATCTCCACTCCCAGAAATACTACGTCAAGTCCATCAATTACTCTTCCCAGATGCTTCGAGTCCTCCATTCGAGTCTAGAGACCGACAAGTTCTGCTCTTCTTTACCTCCCTTGTTGCGCGACGAGTTCAGATACGAGGATCCGTACGTCTTACGTTCTTCCCGCTATTATGGCAGTGGTAGTACTATTATATTCGTGAATTGTTCGGCTCCGGTGGTAAACAATCCTTCCTACATAGCTGCTACTCCTTGCCTCCTCAACAGCAGCAGCACCAGCAGCAACAATAACACTTCTCAGGCATATCTTTATGCCCTTGCCGGTTCACCGCTTGCGTCGGATCTCCACGAGAACTGCAACGTCATAGCGACGGTCCCTGTGCCAGATGAGATACTTGTAGATTCTACTACTATTACTAATTATTCCGAGATTCGATCAACGTTGCTCATGGGTTTTGATTTGTCTTGGAAGCAACCCTTCTTTTGCAGGGATTGCCTGAAAAGGAATCTCACATGTCGAACCTATTTAGAGGGCTCAAGGAATTCCCCTGTTCAATTCTTGTTTCCGTACGATTTTGAGTACTGTGAGTATTCCTCAGCGTGCGACGGATCCTACCTATCTCCTCATTGTTTTTTTCGCTTCGTGTCATGGATCTTATTAGATATAGTTTATTATGGGGGAGTTTATGGGAGACAGCTCTTGGCACTTCTCATCATTGCAAGAGCGTTTATTGGGACATTATGCTTGTCTGCATTTTTGGTCTATAAATTTAGAAGGAGACATGTATGGATGGATACCACTGTTGAAGAGTTCTTAAGTAATTATAGAAAGCAAACCCCAACAAGGTACTCTTATTCTCAAATCAAGAAGATGACCAACAATTTCAAAGAAAAATTAGGTCAAGGAGGCTACGGCTCGGTGTACAAAGGAAAGCTCCTAAGTGGCCATATTGTCGCAATAAAATTGTTAGACAAGTCCAAGGGTAACGGACAGGAATTCATCAATGAAGTTGCCACCATCGGAAGAATTCATCATCTCAATGTGGTGCGATTCATCGGATTTTGCTCCGACGGATCAAAGAGGGCTCTTATTTATGACTTCATGCCTAATGGCTCTTTGGATAAATATATCTTCCCGCAAGAAGGGAAAATCAATCCTCTTGGTTGGGAGAAGATATTTGAGATTGCATTAGGAATAGCTCGTGGGATTGATTACCTGCATCGAGGCTGTGACATGCAAATTCTACATTTCGACATTAAGCCTCATAATATTCTTCTTGATAAGAACTTTGTACCAAAAATTTCAGACTTTGGACTTGCAAAATTCTACCCAACAAATGATAGCATTGTTGCAGTCACTGCTGTAAGAGGAACCATGGGATACATAGCCCCCGAACTAATTTATAGGAACGTCGGAGGCGTATCGTATAAGTCCGATGTTTATAGTTTTGGTATGATGTTGATGGAAATGGCAGGCAGAAGGAAGAATTTGAATGCGTTGGCGGAGAATACGAGCCAAATTTACTTTCCATTATGGATTTATGACAGGCTCGATGAAGGAAGGGATTTGGAATTAGAGGACACCAGTGAAGATGAGAAGGAAATAGCAAAGAAGTTGATCATAATTGCGTTATGGTGCATTCAGATGAAACCGTCGGATCGTCCTTCCATGAGCAAAGTTGTCGAGATGCTTGAAGCAAGTCAGGAACTTTTACAAATGCCACCCAAGCCTTTTGTATCTCCTTCAAATTGCGTTCCTGAAGAAGATCAAGCAATTGTCACGGATCCACCACAACTAGTATCACACTCTAGTTTATCTATGGAATCAGGCACTTGA 2085 0.4331 MSVFSVIRATCMCIVMRKMGSVAFYFMFFSVAAGDIVMGEACSSYTSSCGDIHLISYPFGLKGDPNNCGDPQYQLACESNRTVLHLHSQKYYVKSINYSSQMLRVLHSSLETDKFCSSLPPLLRDEFRYEDPYVLRSSRYYGSGSTIIFVNCSAPVVNNPSYIAATPCLLNSSSTSSNNNTSQAYLYALAGSPLASDLHENCNVIATVPVPDEILVDSTTITNYSEIRSTLLMGFDLSWKQPFFCRDCLKRNLTCRTYLEGSRNSPVQFLFPYDFEYCEYSSACDGSYLSPHCFFRFVSWILLDIVYYGGVYGRQLLALLIIARAFIGTLCLSAFLVYKFRRRHVWMDTTVEEFLSNYRKQTPTRYSYSQIKKMTNNFKEKLGQGGYGSVYKGKLLSGHIVAIKLLDKSKGNGQEFINEVATIGRIHHLNVVRFIGFCSDGSKRALIYDFMPNGSLDKYIFPQEGKINPLGWEKIFEIALGIARGIDYLHRGCDMQILHFDIKPHNILLDKNFVPKISDFGLAKFYPTNDSIVAVTAVRGTMGYIAPELIYRNVGGVSYKSDVYSFGMMLMEMAGRRKNLNALAENTSQIYFPLWIYDRLDEGRDLELEDTSEDEKEIAKKLIIIALWCIQMKPSDRPSMSKVVEMLEASQELLQMPPKPFVSPSNCVPEEDQAIVTDPPQLVSHSSLSMESGT* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00041 694 PANTHER RUST RESISTANCE KINASE LR10-RELATED 348 666 IPR045874 GO:0004672
Eupl04g00041 694 MobiDBLite consensus disorder prediction 679 694 - -
Eupl04g00041 694 MobiDBLite consensus disorder prediction 657 694 - -
Eupl04g00041 694 SMART serkin_6 376 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00041 694 Pfam Protein kinase domain 378 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00041 694 CDD STKc_IRAK 382 648 - -
Eupl04g00041 694 FunFam serine/threonine-protein kinase PBS1-like 346 450 - -
Eupl04g00041 694 Gene3D Phosphorylase Kinase; domain 1 349 450 - -
Eupl04g00041 694 SUPERFAMILY Protein kinase-like (PK-like) 354 648 IPR011009 -
Eupl04g00041 694 Pfam Wall-associated receptor kinase galacturonan-binding 42 105 IPR025287 GO:0030247
Eupl04g00041 694 ProSiteProfiles Protein kinase domain profile. 376 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00041 694 ProSitePatterns Protein kinases ATP-binding region signature. 382 404 IPR017441 GO:0005524
Eupl04g00041 694 Gene3D Transferase(Phosphotransferase) domain 1 451 657 - -
Eupl04g00041 694 FunFam PR5-like receptor kinase 451 659 - -
Eupl04g00041 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00041 Eupl-Chr4 912940 916198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00041 339 670 Receptor kinase-like Gene Family AT5G38280 50.147 2.03e-111 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Eupl04g00041 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00041 - - ming:122090156 707.597