Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00039 ATGGGATCTGCACTATCCCTTGATCAGCATAAAGTGAGTACTCTGGTGTCCGTCCATCCAGAAATGGTGCAAGGATCTGAAGACATCCCCAAGCCTTCAGGGGAACTTAGTGTTAGTTTTGGCTATCAGTGCAGCGCTAGTGACGACAATAGCGCCTTTGTGTTACCTAATGAGTTTGAGTATTCAACTGGTATCCAGATTCAAAATTCCAACATGAGGACAAGGAGCGGCTCCTTTTCTTGTTTGTCTGGTGCTGCTCTTAGTGCTAATGCTACCTTGGCAAACACGAATATTTGTAATGGTCTCATTGGAGAGGAAATATTGCCTGGTCTGGATTCTCCCAAATCATTTAGAAAGATGGCATCCTCTCCTTCTCTTTCACGGTTAGATCCTCTATCATATTCTTCTCAGAGTAGCATGTCTACTTTGGGTGGAAGTGTATCAACAGAGAATGACTTCATTGAAAGCGGAAGAAATTTGTGGAAGCCTATGAGTGCTCCAACCAGGAGAGAGTCATCCAGCTTTCTCAACGCTATGGATGTACAGATGGCTGGTGGGGCTGCAGGGGAAGACAGAGTGCAAGCTGTATGTTCTGAAGAAAATGGATGGCTGTTTTGTGGAGTATATGATGGATTCAATGGACGGGATGCAGCTGATTTTTTAGCTGGAACTCTGTATGAAAATATAGGCTTTTACCTCCATTTGCTGGAATGGCGTACGAGAAAGCTACGGGATTCATCCAACAGTGGTTCAGCAGAAGATGGCATCATCAGTAGTGAATTGTCTCCAGCTAATGAACAAGACACTTCAGATTCTGGACCCGAAGGAACCATCCCTCCACATTCTTTGGAGGGAGAGTTCCCAACTGATTCATTCCTGCTGGGAGTGATGGACTGTCTCACTCGTGCCCTTGCCCAAGCTGAGAGTGATTTTATGTACATGGTTGAACAGGAAATGGAAGATCGACCAGACTTGGTGTCTGTTGGATCTTGTGTCCTGGTGGTGGTTCTTCATGGGAAGGACTTGTACATTCTAAATTTAGGTGACAGCAGGGCTGTACTGGCAACAAGTGACATCAAAGAAGATTGTTTAGTGAAAGCCATCCAACTGACAGAAACTCATACAGTTGATAATGAAATAGAGTGCAGGAAAGTTTTGTCTGATCACCCTGATGATCCTTCCCCTATTGTTGGGGGAAGAGTGAAAGGAAAGCTGAAGTTAACCAGGGCATTTGGAGTTGGTTACCTGAAAAAGAGTAAAATGAATGATGCGCTGATGGGCATTCTTCGAGTTCGAAATTTAAGCAGTCCGCCTTACGTTTATACTCATCCATTCACCAAGAGTCACAGTGTGTCAGAGAATGACCAATTTGTTGTTTTGGGGAGCGATGGATTATTTGATTTCTTCAGCAATGATGAAGTTGTGCGGCTTGTTCATTTGTTTATCCAGGAAAAACCTTTTGGTGATCCTGCAAAGCATCTGGTTGAGCAGCTTGTTCTGAGAGCTGCTGAAAATGCAGGTTTCAGTACTGAAGAGTTGATGAGGATTCCTGTCGGGAGGAGGAGGAAGTATCATGATGATGTGACGGTTATTGTAATAATCCTTGGCAATAAGCAGCGAACATCCACTGCTTCCACATCTTTGTAA 1647 0.4414 MGSALSLDQHKVSTLVSVHPEMVQGSEDIPKPSGELSVSFGYQCSASDDNSAFVLPNEFEYSTGIQIQNSNMRTRSGSFSCLSGAALSANATLANTNICNGLIGEEILPGLDSPKSFRKMASSPSLSRLDPLSYSSQSSMSTLGGSVSTENDFIESGRNLWKPMSAPTRRESSSFLNAMDVQMAGGAAGEDRVQAVCSEENGWLFCGVYDGFNGRDAADFLAGTLYENIGFYLHLLEWRTRKLRDSSNSGSAEDGIISSELSPANEQDTSDSGPEGTIPPHSLEGEFPTDSFLLGVMDCLTRALAQAESDFMYMVEQEMEDRPDLVSVGSCVLVVVLHGKDLYILNLGDSRAVLATSDIKEDCLVKAIQLTETHTVDNEIECRKVLSDHPDDPSPIVGGRVKGKLKLTRAFGVGYLKKSKMNDALMGILRVRNLSSPPYVYTHPFTKSHSVSENDQFVVLGSDGLFDFFSNDEVVRLVHLFIQEKPFGDPAKHLVEQLVLRAAENAGFSTEELMRIPVGRRRKYHDDVTVIVIILGNKQRTSTASTSL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00039 548 Gene3D - 159 545 IPR036457 -
Eupl04g00039 548 SUPERFAMILY PP2C-like 188 537 IPR036457 -
Eupl04g00039 548 PANTHER PROTEIN PHOSPHATASE 2C 177 533 IPR015655 GO:0004722|GO:0006470
Eupl04g00039 548 MobiDBLite consensus disorder prediction 119 147 - -
Eupl04g00039 548 SMART PP2C_4 166 533 IPR001932 -
Eupl04g00039 548 MobiDBLite consensus disorder prediction 249 276 - -
Eupl04g00039 548 MobiDBLite consensus disorder prediction 246 282 - -
Eupl04g00039 548 Pfam Protein phosphatase 2C 298 491 IPR001932 -
Eupl04g00039 548 ProSiteProfiles PPM-type phosphatase domain profile. 175 535 IPR001932 -
Eupl04g00039 548 CDD PP2Cc 188 535 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00039 Eupl-Chr4 894670 896682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00039 32 546 PP2C-type Phosphatase Gene Family AT3G16560 57.670 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00039 - - nnu:104591927 830.861