Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00024 ATGTTTCCAGTGAAGCCCTTGAAGCTGCCCGAATTGCATGCAACAAGATTCAATGGAAACCATGCCCAAGAGGCGTTGAAGGGGGTCAAATTTAAGTTCCCTGGAAGGCAGAAGATCATTGCGAGCAGGAACTGTTGCTTCACCACGTTTAGCAGGAGAACAGGATTTGTCCCTGGACTTAATGCAAAGCTCTTAGGATGCCACGGGCCTCTTGCTGATAGGCAGCCTGGAAGGGCATTCGTGAGTGGAGCTCTGGCGTCTACTGCATAG 270 0.5074 MFPVKPLKLPELHATRFNGNHAQEALKGVKFKFPGRQKIIASRNCCFTTFSRRTGFVPGLNAKLLGCHGPLADRQPGRAFVSGALASTA* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00024 89 SUPERFAMILY Ribosomal protein L16p/L10e 11 49 IPR036920 GO:0003735|GO:0005840|GO:0006412
Eupl04g00024 89 PANTHER 60S RIBOSOMAL PROTEIN L10 17 78 IPR001197 GO:0003735|GO:0005840|GO:0006412
Eupl04g00024 89 Gene3D Ribosomal protein L10e/L16 8 82 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00024 18 82 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 59.459 1.17e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00024 K02866 - vvi:100241995 100.908