LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl04g00010	ATGAAGAACATGAGAGGGGTCTCTCTTGCTCCTTTCCTTCCTCTTTGCTTCCTCCCGTTCGACGAGCTCGAAAGCCATCATCTCCGGCGACCTTCATTCCGCGATCACCGGCCGTCTTTGTCTCAGTACGGAGACAATTTGGAAAAGCACTTTGGTGAGGGTTCTTCTTCATCTCCGGTGATCGATGAACCGTTGAGGTTGTATTTCGAGGGTTTGGTTAGCGATGAGACGGTTCGGGGTTCGAAGGTTACGCTTGCGGCGGTCGGGGCTGCAATTTGCGATCCTGGGGATACTTTGCTACTGAAGGTACAGAAGCTGTTGATCGGCGATTTGAAGAATCATCGGACCATAGAGCTGATGGCTTTGATCGAAGGTCTCAATGCTGCTCTTTCTTTGTATGTAAAGAGGATCGACTTCTTTTGCGATTACTTCCCGCTCTACCAACATGACTTCTATGATTTCGTGCAAGAATTGGTGTCGCTCATGGCCAGCATTAAGAGAAAGTATCAACATGCTGATGTTGCATTGCAAATGGGGCTGATTGATGGGCTGTTACATTACAGCATACTTGGAAGCACGCCAAAAGAATCGATCAGTCCACCGCTATCTTGGTTTCAGTTATAG	624	0.4808	MKNMRGVSLAPFLPLCFLPFDELESHHLRRPSFRDHRPSLSQYGDNLEKHFGEGSSSSPVIDEPLRLYFEGLVSDETVRGSKVTLAAVGAAICDPGDTLLLKVQKLLIGDLKNHRTIELMALIEGLNAALSLYVKRIDFFCDYFPLYQHDFYDFVQELVSLMASIKRKYQHADVALQMGLIDGLLHYSILGSTPKESISPPLSWFQL*	208

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl04g00010	207	Pfam	Reverse transcriptase-like	82	147	IPR002156	GO:0003676\|GO:0004523

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl04g00010	Eupl-Chr4	511479	522465	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl04g00010	66	142	C3H Transcription Factor Family	AT2G19610	39.241	3.20e-09	53.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl04g00010	-		-	psom:113298551	123.635