Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g00003 ATGTTTGATTCCATGAAGAACACCACCAAACACCCTTTATTCCTCACCATGTTCTCCCCTCTGCACCTCTCCTTCTTCTTCCATCTAATAATCTCCATCACCGCTGCCAATAACTCGTCATTCCATCCCCCTGATATCATCCTCCTCGACTGCGGTTCCTCTTCAAACACTACAGCAATTGACGGCAGAATTTGGAATTCCGACCCCGGACAAGACAACACATCGACAAATGACACTGCGAAAGCCCAAGGCTCTACCCCTCAAGTCCCTTACATGACTGCTCGTATCTTTCGCTCTCAATTTACCTACTCGTTCCCCGTCTCCTCCGCTGGCCCAAAATTCATCCGTCTCTATTTCTATTCTGCTTCCTACTCCGATCTTAACATATCTAAAGCCTTCTTCTCCGTCACCGTGGGTCGCTACACCTTATTACGTAACTTTAGTGCCTCCCTTACTGCTGATTATCTCAACTCATCCTACTTCACTAGAGAATTCTCAGTCAACGCAGAGAAAGACCAGAGATTAAATGTAACGTTCACACCATCTCCGGATACTTCCGACTCCTTTGCCTTTGTGAACGGAATTGAGATTGTTTCGATGCCCTCGAATCTGTACACTCGCGGGTTAGATCTCCCCTTCTTGTTTTCCCAACAGACGAGTCTGTTCTCCATACATAACGAAACAACAGCCATGGAGACAGTTTACCGACTAAACGTCGGGGGGAACGTTATCCCACCTGTAGATGACACTGGCATGTTTCGGACCTGGGAAATTGACCAACAGTACGTAGTATCAACGTCTAAAGGCGTAGAGCCGCCTAATTGGAACACTACAATCAGTTACTCAGCCGCAGTACCTGCCTACACTGCACCGGAAGGGGTCTACATGACGTCCAGGACGATGAGTCTCGATAAGACGTTTAACACAAACAACAATCTAACATGGTATTTACCTGTTGATACTGGCTTCAATTACCTGGTTAGGCTCCATTTCTGCGAGTACCAATTGGAGATAACGGAGCCTTTTCAAAGGGTGTTTTTTATCTTTATCAACAATCTGACGGCCGAGAGTGCAGCGGATGTCATCTCATGGAGTGGCGGGAACGGAGTTCCAGTGTATAAAGACTACGTTGTGAATGTTCCAGAAGGAAGCGGGGACAAGCAGGGTCTGTGGATCGCGCTACATCCTGTCCCAGAATCAAATACTCCGTACTCAAGCGCAATCTTAAACGGGCTGGAGATCTTCAAATTGAGCAGTGATGAAGGCAATCTCGCCGGACCCAATCCTCCACAGAAAGTGGGCCCGTCTCCGCCTGAACTGTCTTCCCCTCTATCAGATAATCCAAAGAAGAATCGGACTCCAGTCATTATTGCCGGAATTGTGATAGGGGGGTTCGTTGCACTATCTGCTCTGTGTTTCTTTGTTTTCCAGCGTCGGGGGAGAGGGAAAAACTCCGCTGTCGACAAGACATCCCGGTGGGTCCTACCCTTCAACTCTGTGGAATTATCAAAAGCTAACACGTCATCACTACCGTCGGACCTCTGTCGTCATTTCTCGTTTGCCGAGATCATAGCAGCGACCAACAACTTCGACGAAGCTTCTCTCATCGGTATGGGCGGCTTCGGAAGTGTCTACAAGGGCCACATCGACGGTGGAACCACCACCGTTGCGATCAAACGAGGGAATCCGACGTCACAGCAAGGGGTCCACGAGTTCCAAACGGAGATCGAGTTGCTCTCGAAGCTCCGTCATCTCCATCTTGTCTCTTTGATCGGGTATTGCCAAGAGAACGGAGAGATGATCCTCGTCTATGACTACATGGCCTACGGTACCCTTCGTGGCCATCTGTACAACACCAGTAATCCCCCTGTTCCGTGGAAGCAGAGGCTTGAGATTTGCATTGGAGCAGCACGCGGCTTACATTACCTCCATACAGGAGCGAAGCATACGATTATCCACCGTGATGTGAAGACAACCAACATACTATTGGATGAGAAATGGGTGGCCAAGGTCTCAGATTTCGGGTTGTCGAAGATTGGACCCACGACCCTATCCCGCACCCACGTCAGCACTTTGGTCAAAGGTAGCTTCGGGTATTTGGACCCTGAGTACTTCATGCGTCAGCAACTAACGGAGAAATCCGACGTGTACTCGTTCGGTGTGGTGTTATTCGAGGTGTTGTGCGCAAGGCCAGCGTTGATTACGAAGTTGGAGAAAGAGCAGGCAAGCTTGGCTGAGTGGGCCCGACACTGCAATAGGAGCGGAACCCTTCATCGGATTATTGACCCATATCTTAAGGATAAGATCGCTCCCGAATGTTTAAAACGGTTTGCAGAGATCGCTGAGAACTGCGTGGCTGAGCAGGGAATCGAACGACCAGCAATGAGCGACGTGGTGTGGAACCTTGAGTTTGCGTTGCAGCTTCAGGAGAATGCAGAGGACAATTGTAGGTCCCACAACATGACTGACGATGAGGAGACTCCTTTCAGCACCTCCCACACCATATCAACGGATGACAATGAGTTATCGTCAAGTGTCGAACCAGTTTCGGATTCAATGAGCAGTGGCACAACTGTGACGAGCGTTGGACAACGGATCCTCGCCAGTGGTAGTGATGATTCAGAAAAGCTGATTTCAGGGAACGTGTTCTCTGAGATCATGAATTCAAATGGACGGTGA 2679 0.4923 MFDSMKNTTKHPLFLTMFSPLHLSFFFHLIISITAANNSSFHPPDIILLDCGSSSNTTAIDGRIWNSDPGQDNTSTNDTAKAQGSTPQVPYMTARIFRSQFTYSFPVSSAGPKFIRLYFYSASYSDLNISKAFFSVTVGRYTLLRNFSASLTADYLNSSYFTREFSVNAEKDQRLNVTFTPSPDTSDSFAFVNGIEIVSMPSNLYTRGLDLPFLFSQQTSLFSIHNETTAMETVYRLNVGGNVIPPVDDTGMFRTWEIDQQYVVSTSKGVEPPNWNTTISYSAAVPAYTAPEGVYMTSRTMSLDKTFNTNNNLTWYLPVDTGFNYLVRLHFCEYQLEITEPFQRVFFIFINNLTAESAADVISWSGGNGVPVYKDYVVNVPEGSGDKQGLWIALHPVPESNTPYSSAILNGLEIFKLSSDEGNLAGPNPPQKVGPSPPELSSPLSDNPKKNRTPVIIAGIVIGGFVALSALCFFVFQRRGRGKNSAVDKTSRWVLPFNSVELSKANTSSLPSDLCRHFSFAEIIAATNNFDEASLIGMGGFGSVYKGHIDGGTTTVAIKRGNPTSQQGVHEFQTEIELLSKLRHLHLVSLIGYCQENGEMILVYDYMAYGTLRGHLYNTSNPPVPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKIGPTTLSRTHVSTLVKGSFGYLDPEYFMRQQLTEKSDVYSFGVVLFEVLCARPALITKLEKEQASLAEWARHCNRSGTLHRIIDPYLKDKIAPECLKRFAEIAENCVAEQGIERPAMSDVVWNLEFALQLQENAEDNCRSHNMTDDEETPFSTSHTISTDDNELSSSVEPVSDSMSSGTTVTSVGQRILASGSDDSEKLISGNVFSEIMNSNGR* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g00003 892 MobiDBLite consensus disorder prediction 827 859 - -
Eupl04g00003 892 FunFam Receptor-like protein kinase FERONIA 502 606 - -
Eupl04g00003 892 PANTHER OS03G0124300 PROTEIN-RELATED 20 488 IPR046957 GO:0004672
Eupl04g00003 892 SMART serkin_6 530 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00003 892 Pfam Malectin-like domain 49 416 IPR024788 -
Eupl04g00003 892 MobiDBLite consensus disorder prediction 425 448 - -
Eupl04g00003 892 FunFam Receptor-like protein kinase FERONIA 607 825 - -
Eupl04g00003 892 ProSitePatterns Protein kinases ATP-binding region signature. 536 559 IPR017441 GO:0005524
Eupl04g00003 892 MobiDBLite consensus disorder prediction 817 859 - -
Eupl04g00003 892 CDD TM_EGFR-like 452 479 - -
Eupl04g00003 892 FunFam FERONIA receptor-like kinase 229 418 - -
Eupl04g00003 892 Gene3D Phosphorylase Kinase; domain 1 515 606 - -
Eupl04g00003 892 ProSiteProfiles Protein kinase domain profile. 530 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g00003 892 MobiDBLite consensus disorder prediction 62 85 - -
Eupl04g00003 892 FunFam FERONIA receptor-like kinase 46 201 - -
Eupl04g00003 892 CDD STKc_IRAK 536 803 - -
Eupl04g00003 892 SUPERFAMILY Protein kinase-like (PK-like) 507 805 IPR011009 -
Eupl04g00003 892 Gene3D - 229 419 - -
Eupl04g00003 892 Gene3D - 46 201 - -
Eupl04g00003 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Eupl04g00003 892 Pfam Protein tyrosine and serine/threonine kinase 535 801 IPR001245 GO:0004672|GO:0006468
Eupl04g00003 892 Gene3D Transferase(Phosphotransferase) domain 1 607 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g00003 Eupl-Chr4 361891 365052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g00003 30 892 Receptor kinase-like Gene Family AT3G51550 56.130 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl04g00003 Malectin_like 4.9e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g00003 - - msin:131253646 957.977