Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02568 ATGGAGTTCTCCTCACCATCGATTTTCTCCTTGTTTTTCTTCTTCTTCTTCTTCTTTGTATCTCCGTTTGGTTTCTCAAAAGCCCAACAAGCTTACGTTAACAACAAACAGCTCGACTGCGAAAACTACAAAAACGACTCCTTAACAATCGGATTCCTCTGCAATGGCCCTCAAAGATCTTGCAATTCCTATCTCACCTTCCGATCTCAACCTCCCTACGATACTCCGACTGCCATTGGCTATCTCTTGGGCGCAGAACCATCAACGATTGCCGATATCAACAACATCACCGACGTCGACCAGATTCCAGTGGACACCCAGATCATAGTTCCTGTGAATTGCTCCTGTTCAGGTAGGTTCTACCAGCACAACACCTCTTACGCCTTGAAATACTCGTCTGAGACGTATTTTACCCTCGCCAATGACACTTACCAGGGCCTCACTACTTGCCAATCCTTGATAAATCAAAATCCTTATGGTACTCGAAACCTGACTGTCGGTTTGAAACTGTCGGTCCCACTCAGATGTGCTTGCCCTAGTACAAACCAGACTGCTAATGGTGTGAGGTTCTTGCTGACTTATTTGATTACATGGGGTGATAGTATTTCTTCAATTGGCAAAACCTTCGGTGCCGACGAACAGATAATAAACGACGCGAATGAGTTATCTTGGAATAGCATCATTTACCCCTTCACGCCCATTTTGGTTCCGCTTAAAACAGAGCCGACAAAGATCCAAAATGCAAGCCCTCCTTCACCACAGGTACAGTCTCCACAGCCCTCAATTATCCCTGCCGAGGAAGGTAAATCTTCAAAGAAATGGGTTTTCGTCGGAATTGGAATTGCAGTTGGGTTAATTGTTTTAGCCCTCTTCGGATTTCTGGCTTGGTTCCTGCGTCGCCGGTCTCAACGAAGCAAGCCAATTCCAGAACCTAAGAAGCTCGTTATTTCTACTGATTACACGGCCATACCTGAAAATAAATCCGATTATGTATCTTCTGAAGCTTCTCGATATGTTACCGATTCCTTGACTGTGTATAAGTTTGAAGAGCTGCGAAGGGCTACTGGATTTTTCAGCGAAGATAACAGAATCAAAGGATCTGTTTATCGCGCTGTTATTAATGGCGATAATGCTGCTATAAAGAGGATGAAAGGGGATGTCTCCAATGAAATTAATATACTGAAACAGATCAATCATTCAAATATAACTAGGTTGTCTGGTTTCTGTGTGCACGAGGGGAACACCTATCTTGTTTACGAGTTTGCGGAGAATGGGTCTCTCAGTGATCGGCTTCATGAGAAGAAGTATCAAAATTCTTGTCTTGGATGGAAGCAAAGAGTTCAGATTGCCTATGATGTAGCAGACGGGCTTAATTACCTTCACAACTACTCAAATCCTCCCTACATCCACAAGAACTTGAAGAGCAGTAACATTCTCTTAGATGGTTACTTTAGAGCCAAGATTGCGAATTTTGGCCTGGCAAGAACAGTGGAAAACCAGGAAGAAGGGGGTCTGCAATTGACAAAACATGTAGTGGGTACTCAAGAGTCTCAGACAGCCAAAGTAGCATTGGGTATCCGCATGCATTCAACATGGAATACCCTAATTCAGTGCAACATGGATCATATTGTTAATACCTATTAA 1644 0.4343 MEFSSPSIFSLFFFFFFFFVSPFGFSKAQQAYVNNKQLDCENYKNDSLTIGFLCNGPQRSCNSYLTFRSQPPYDTPTAIGYLLGAEPSTIADINNITDVDQIPVDTQIIVPVNCSCSGRFYQHNTSYALKYSSETYFTLANDTYQGLTTCQSLINQNPYGTRNLTVGLKLSVPLRCACPSTNQTANGVRFLLTYLITWGDSISSIGKTFGADEQIINDANELSWNSIIYPFTPILVPLKTEPTKIQNASPPSPQVQSPQPSIIPAEEGKSSKKWVFVGIGIAVGLIVLALFGFLAWFLRRRSQRSKPIPEPKKLVISTDYTAIPENKSDYVSSEASRYVTDSLTVYKFEELRRATGFFSEDNRIKGSVYRAVINGDNAAIKRMKGDVSNEINILKQINHSNITRLSGFCVHEGNTYLVYEFAENGSLSDRLHEKKYQNSCLGWKQRVQIAYDVADGLNYLHNYSNPPYIHKNLKSSNILLDGYFRAKIANFGLARTVENQEEGGLQLTKHVVGTQESQTAKVALGIRMHSTWNTLIQCNMDHIVNTY* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02568 547 Gene3D LysM domain 192 248 IPR036779 -
Eupl03g02568 547 SUPERFAMILY Protein kinase-like (PK-like) 333 514 IPR011009 -
Eupl03g02568 547 CDD TM_EGFR-like 279 306 - -
Eupl03g02568 547 ProSiteProfiles Protein kinase domain profile. 354 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02568 547 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 515 - -
Eupl03g02568 547 ProSiteProfiles LysM domain profile. 192 236 IPR018392 -
Eupl03g02568 547 Gene3D Phosphorylase Kinase; domain 1 320 421 - -
Eupl03g02568 547 FunFam Os07g0541700 protein 423 514 - -
Eupl03g02568 547 Pfam Protein tyrosine and serine/threonine kinase 380 502 IPR001245 GO:0004672|GO:0006468
Eupl03g02568 547 Gene3D Transferase(Phosphotransferase) domain 1 422 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02568 Eupl-Chr3 58207419 58219125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02568 12 515 Receptor kinase-like Gene Family AT2G33580 51.243 3.27e-156 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl03g02568 PK_Tyr_Ser-Thr 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02568 - - ming:122083333 688.723