Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02564 ATGTTGGCAGGGACTTCAATTTCAGAACAATTTGAAGTGGAGTCCTCAAAGTCAGGGATTATGAATTCATCTGCAGCAAGCTCTAATGTCTCATCATCTGGTAATAGTGATCAACGGCAATCAATTGAAGTCTTTGAACCCAAGAGTTATGTTGGACAGCCTAGTGTGAGAAGAGAGATAGAGAGCCAGAGTTCAATTCAGATGCATGAGGGAGCATCAAGGACCTCCTCTGGGAGGGAACTTGCCGATAAGTGGATGGCATTTACAAATGAGTCTGGGAAATCAAAGGCCACTGACGAATCCAAACCAGATTTGAATAGGAGTATACAGAGAGACAATGATTTCTTGGATGACTCAAATGAAGCTGGTGGCGACCCTTCAAATGGCCAATCTAATCAGTTTACGAGTGAAGCTAGCAGGGCTGAAAGGGCTGTGGAATGGGGACTGGCATTTAAGTCAGAAATCAGGGCAGGTAATCCTGATGCCGAGGGTCAAAGGTCATCGGGAGAGGGAAGTAAAGTTTCACTGGAGAGATCTTTAGATTTGACAAGTTTATCAGAAGAATCTGAATCAGGCTTCCTTAGAGTCTCTCAAGAGCTGAAGGATGCGCTGGCTATGCTTCAACAGACATTTGTTGTGTCAGATGCGACCAGACCGGACTGTCCTATAATGTATGCCAGCTCTGGGTTTTTCAGTATGACTGGTTATTCTTCAAAGGAGGTCATTGGGAGGAACTGTCGCTTTCTTCAGGGACCTGATACAGATCAGAATGAATGTGCAAAAATTCGAGAAGCCGTCAGAACTGGGAAAAGCTACTGTGGCAGACTCCTGAACTACAAGAAGAATGGCACAGCTTTCTGGAATCTTCTAACCATCACACCTGTAAAAGATGATAATGGGAAGGTTATCAAATTTATAGGAATGCAGGTTGAAGTCAGCAAATACACGGAAGGTTTGAATGACAAGGCATTTCGACCAAATGGTTTGCCAAAGTCCCTAATCCGTTATGATGCTCGTCAGAAGGAGAAAGCCTTGTGTTCCATCACGGAGGTTGTCCACACTGTGAAGCAACCACGAGCTCATATTCAAGCGACAGATCATGAGGCCTCTGGCAAGCCCGAGGAGCAAGAGAAGTTTAACCTTGATTATTTTCTGCCAAAATCTGCAGAGCTTGAGAACCTAAGTACACCTGGTAGACAAACTCCTCAACTGGATGCCAGAAGTGATGTATCCAGAATGAGTTCTACTCATGATGCTAGCAAGAAATCTAGAAAATCAGGACGCATTTCCTTAATGGGGTTGAAAAGGAGGTCCCTAAGCTCTGCAGAAAAGAATGATCCTCAGCCTAGTATTGAGCCAGAGTTTTTGATGACCAGAGACGTACAATGCACTGACAACTGGGACCATATGGAAAGAGAGAAGGATATACGCCAAGGAATTGACTTAGCGACAACATTGGAACGCATTGAAAAGAATTTTGTGATAACAGATCCTAGACTTCTGGATAATCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACGGAGTACACTCGGGAAGAAATTTTGGGAAGAAACTGCCGATTTCTTCAAGGCCCTGATACGGATCCAGGAACTGTCTCAAAAATAAGAGATGCTATCAGAGAACAAAGGGAAATCACTGTCCAGTTGATTAACTATACAAAGAGCGGGAAGAAATTTTGGAATTTATTCCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTACAATACTTCATTGGTGTGCAATTAGATGGAAGTGATCATGTGGAACCCCTTCGAAACCGCCTCTCTGAGAAGACCGAGCAGCAAAGTGCTAAGCTGGTCAAAACTACTGCAGAAAATGTTGATGACGCTGTTCGAGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATCCATTCTCGACCTGTCTTTCCAAGGCCTCATAAAAGGAACAATTCTTCTTGGATGGCAATTCAAAAGATCATGGCAAGTGGTGAACAAATTGGTCTGAAACATTTCAAGCCCATAAGACCTTTGGGTTGTGGCGATACTGGCAGTGTGCATTTGGTGGAATTGCAAGGTACAAGTGAATTGTATGCTATGAAGGCGATGGACAAATCTGTAATGTTGAATCGTAACAAGGTTCATCGGGCATGCACTGAAAGGGAAATCATATCACTACTGGATCATCCTTTTCTTCCAACACTATACACTTCTTTTCAGACTACTACACACGTTTGTCTGATAACAGACTTTTGCCCTGGGGGGGAGCTATTTGCTTTGCTTGACAAGCAGCCTATGAAGATTTTTAAAGAGGAATCTGCAAGGTTCTATGCTGCGGAAGTCGTAGTTGGCTTGGAATATCTTCATTGTTTAGGAATAATCTATCGGGACCTGAAGCCTGAAAATTTATTACTCCAAAAGGATGGGCATGTTGTACTAACTGACTTTGATCTATCATTTTTGACGTCCTGTAAACCCCAAGTTTTAAAGCATCCATTGCCTGCAAAGAGAAGAAGATCTAGAACTCAACCACTTCCGGCATTTGTTGCAGAACCTATTACACAATCGAATTCATTTGTTGGAACCGAAGAGTACATTGCTCCTGAAATAATTACGGGTGAAGGCCATAGTAGCGCTATTGATTGGTGGGCTCTAGGTATTTTGCTGTATGAGATGCTTTATGGCCGCACACCTTTCAGGGGAAAGAACAGGCAGAAAACATTTGCCAACATACTGCACAAAGACCTCACCTTTCCAAGTAGCATCTCGGTAAGCCTTGCAGCTAGGCAATTGATCCATGGATTATTACACAGAGACCCTGCAAATCGTTTAGGATCAAACAGTGGTGCCAATGAAATCAAACAACACCCTTTCTTCCGTGGAATCAACTGGCCCCTTGTCCGTTGCATGAACCCACCACCCCTAGACATGCCTCTTCAATTAATTGGAAAAGAACCGGACTCAAAAGCTAAGGATGCACAGTGGGAAGATGAAGGAGTGCTCGTTCAGTCTTTGGAAATTTTTTAA 3048 0.4327 MLAGTSISEQFEVESSKSGIMNSSAASSNVSSSGNSDQRQSIEVFEPKSYVGQPSVRREIESQSSIQMHEGASRTSSGRELADKWMAFTNESGKSKATDESKPDLNRSIQRDNDFLDDSNEAGGDPSNGQSNQFTSEASRAERAVEWGLAFKSEIRAGNPDAEGQRSSGEGSKVSLERSLDLTSLSEESESGFLRVSQELKDALAMLQQTFVVSDATRPDCPIMYASSGFFSMTGYSSKEVIGRNCRFLQGPDTDQNECAKIREAVRTGKSYCGRLLNYKKNGTAFWNLLTITPVKDDNGKVIKFIGMQVEVSKYTEGLNDKAFRPNGLPKSLIRYDARQKEKALCSITEVVHTVKQPRAHIQATDHEASGKPEEQEKFNLDYFLPKSAELENLSTPGRQTPQLDARSDVSRMSSTHDASKKSRKSGRISLMGLKRRSLSSAEKNDPQPSIEPEFLMTRDVQCTDNWDHMEREKDIRQGIDLATTLERIEKNFVITDPRLLDNPIIFASDSFLELTEYTREEILGRNCRFLQGPDTDPGTVSKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSAKLVKTTAENVDDAVRELPDANLRPEDLWAIHSRPVFPRPHKRNNSSWMAIQKIMASGEQIGLKHFKPIRPLGCGDTGSVHLVELQGTSELYAMKAMDKSVMLNRNKVHRACTEREIISLLDHPFLPTLYTSFQTTTHVCLITDFCPGGELFALLDKQPMKIFKEESARFYAAEVVVGLEYLHCLGIIYRDLKPENLLLQKDGHVVLTDFDLSFLTSCKPQVLKHPLPAKRRRSRTQPLPAFVAEPITQSNSFVGTEEYIAPEIITGEGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSISVSLAARQLIHGLLHRDPANRLGSNSGANEIKQHPFFRGINWPLVRCMNPPPLDMPLQLIGKEPDSKAKDAQWEDEGVLVQSLEIF* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02564 1015 Gene3D PAS domain 210 381 - -
Eupl03g02564 1015 SMART pas_2 198 267 IPR000014 -
Eupl03g02564 1015 SMART pas_2 480 549 IPR000014 -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 392 451 - -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 411 425 - -
Eupl03g02564 1015 Gene3D PAS domain 467 631 - -
Eupl03g02564 1015 SMART serkin_6 679 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02564 1015 Gene3D Transferase(Phosphotransferase) domain 1 763 975 - -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 1 43 - -
Eupl03g02564 1015 ProSiteProfiles PAS repeat profile. 478 551 IPR000014 -
Eupl03g02564 1015 SMART pac_2 273 315 IPR001610 -
Eupl03g02564 1015 SMART pac_2 555 597 IPR001610 -
Eupl03g02564 1015 NCBIfam PAS domain S-box protein 223 313 IPR000014 -
Eupl03g02564 1015 NCBIfam PAS domain S-box protein 502 596 IPR000014 -
Eupl03g02564 1015 SUPERFAMILY PYP-like sensor domain (PAS domain) 217 309 IPR035965 -
Eupl03g02564 1015 Gene3D Phosphorylase Kinase; domain 1 678 762 - -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 1 139 - -
Eupl03g02564 1015 ProSiteProfiles Protein kinase domain profile. 679 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02564 1015 PANTHER FLIPPASE KINASE 1-RELATED 188 983 - -
Eupl03g02564 1015 Pfam PAS domain 502 593 IPR000014 -
Eupl03g02564 1015 Pfam PAS domain 217 313 IPR000014 -
Eupl03g02564 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Eupl03g02564 1015 ProSiteProfiles PAC domain profile. 552 606 IPR000700 -
Eupl03g02564 1015 CDD PAS 493 593 IPR000014 -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 393 410 - -
Eupl03g02564 1015 FunFam LOV domain-containing protein 678 762 - -
Eupl03g02564 1015 FunFam Putative LOV domain-containing protein 763 978 - -
Eupl03g02564 1015 SUPERFAMILY PYP-like sensor domain (PAS domain) 494 593 IPR035965 -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 56 74 - -
Eupl03g02564 1015 FunFam LOV domain-containing protein 467 631 - -
Eupl03g02564 1015 CDD PAS 223 312 IPR000014 -
Eupl03g02564 1015 ProSiteProfiles PAS repeat profile. 196 269 IPR000014 -
Eupl03g02564 1015 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Eupl03g02564 1015 FunFam Putative LOV domain-containing protein 210 366 - -
Eupl03g02564 1015 Pfam Protein kinase domain 681 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02564 1015 CDD STKc_phototropin_like 677 989 - -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 95 118 - -
Eupl03g02564 1015 SUPERFAMILY Protein kinase-like (PK-like) 654 987 IPR011009 -
Eupl03g02564 1015 ProSiteProfiles PAC domain profile. 270 324 IPR000700 -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 123 139 - -
Eupl03g02564 1015 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02564 Eupl-Chr3 58121728 58144336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02564 118 1014 AGC Kinase Gene Family AT5G58140 69.757 0.0 1273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl03g02564 Pkinase 1.2e-62 CL0016