Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl03g02562 | ATGTTTTGCCTTGTGTTTCCTCAGTCTCGTTTGTCTGTTGTAACAATTATCTTCTATACTTGTGTTTGGATTCCATTCTTTCAGATCAAGCAGGCTCTTCTTCGCTTAATCAGGTTCGTCTCTGGGACGACGTGCCAACCAATGCAGAGCTTCACTATCCCTATGGAATGCCTAGAAGGAGCTTGCTACGAACAGTTCGATAATGATCTTCCAGTAGTGAGATATGAGGAGTTAGATTGTACATATGGAAGAGTTGACGAATTGTGTTCAGTTTGCTTGGGCGAATTCGAAATAGACGAGGAGGTGAGCCAGCTCTCAGGGTGTGGGCATGTGTTTCACCTACGCTGCATTAAGAGTTGGCTCGATCGCAACAAGTTCACCTGCCCGCTCTGTAGGACATCGGTTTACTTAAACGTTGCCGATGTTTGCCATGGAAAATGCGGTATCATAAACACCATGTGA | 462 | 0.4502 | MFCLVFPQSRLSVVTIIFYTCVWIPFFQIKQALLRLIRFVSGTTCQPMQSFTIPMECLEGACYEQFDNDLPVVRYEELDCTYGRVDELCSVCLGEFEIDEEVSQLSGCGHVFHLRCIKSWLDRNKFTCPLCRTSVYLNVADVCHGKCGIINTM* | 154 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl03g02562 | 153 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 136 | IPR013083 | - | |
Eupl03g02562 | 153 | ProSiteProfiles | Zinc finger RING-type profile. | 89 | 132 | IPR001841 | - | |
Eupl03g02562 | 153 | SMART | ring_2 | 89 | 131 | IPR001841 | - | |
Eupl03g02562 | 153 | PANTHER | - | 32 | 137 | IPR044249 | - | |
Eupl03g02562 | 153 | Pfam | Ring finger domain | 89 | 132 | IPR001841 | - | |
Eupl03g02562 | 153 | SUPERFAMILY | RING/U-box | 68 | 138 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl03g02562 | Eupl-Chr3 | 58106968 | 58107429 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl03g02562 | 64 | 141 | C3H Transcription Factor Family | AT2G04240 | 42.308 | 3.72e-16 | 69.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl03g02562 | - | - | msin:131223941 | 144.05 |