Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02555 ATGGTTGGTCCGATGGTTCCAATGAGGAACGACGAGTTGGGTCCGCCATGGTTGAAGCCGATGTTGAGGGCGGGCTACTTCCTTTCCTGTAGAATCCATGGAGATTCCAACAAGAGCGAATGCAACATGTTTTGCTTGGACTGCATGGGGAATGCTCTGTGTTCCTACTGTTTGATCCATCACAAAGACCATCACATTGTTCAAATACGGAGGTCTTCGTACCATAACGTGATAAGAGTTAACGAGGTTCAGAAATACATCGACATTTCTGGCGTTCAAACCTACATTATCAACAGTGCGAAGATCGTTTTCCTCAACGAACGGCCCCAACCAAGGCCAGGAAAGGGCGTCACCAATACATGTGAGATTTGTTGCAGGAGCCTCCTCGATTCCTTCCGGTTCTGTTCTCTCGGATGCAAGCTCGGAGGCATGAAGCGCGGTGACCCGGAACTCACGTTCACACTGCGGCCTAAGCACGGGCGGGACATGTTTAATAACTTGGAGTCGGACGATTCATCGACCCCAAGGAAGATTCGAAGGACTACTATGTTCAACCGTTTGATCGATGCCCAAGTCTCGTCTGATGGAAACAAAGACTCCGGGGAGAAGTATGCAAGCTCCGGCGATGAGGCTGGGAACAACATATCTCCGGGGACTCCTCCGATCATCAATTACCGTACAGCCAGAAGGAGAAAGGATAACAGGTTGAGACTTGAGAGGGACCCATTTACTTATCGGCGGTTTTCATGCCCTGTGAAAGTTGGATAA 768 0.4961 MVGPMVPMRNDELGPPWLKPMLRAGYFLSCRIHGDSNKSECNMFCLDCMGNALCSYCLIHHKDHHIVQIRRSSYHNVIRVNEVQKYIDISGVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSFRFCSLGCKLGGMKRGDPELTFTLRPKHGRDMFNNLESDDSSTPRKIRRTTMFNRLIDAQVSSDGNKDSGEKYASSGDEAGNNISPGTPPIINYRTARRRKDNRLRLERDPFTYRRFSCPVKVG* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02555 255 MobiDBLite consensus disorder prediction 191 224 - -
Eupl03g02555 255 MobiDBLite consensus disorder prediction 191 221 - -
Eupl03g02555 255 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 234 - -
Eupl03g02555 255 CDD Bbox2 30 69 - -
Eupl03g02555 255 Pfam PLATZ transcription factor 70 141 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02555 Eupl-Chr3 58027228 58030822 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Eupl03g02555 PLATZ 3.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02555 - - ming:122073195 377.096