Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02553 ATGTTTCATGAAATGGGTTTGCCTGAAAAGCTCACCCTATTATATCTACTGGTTTTTCCGGCCATCTCGATGGCTTCAAACCTAAAAATCTATTCCCATCAATTCGGCCCATTTCACTCTTCGGACTACGATACCTTCTCCGTCCTACCAGACGCGACGATCAGCAACAAAGCCCTTCAAATCCTTCCGGACAGTGCCAACAAGGACTCCAGCCTAAAAAACAAGTCGGGCCGCATCATGCTCTCCAAATCTTTCAAGCTCTGGGAAGGAGAGATCAACTCTACATCTGAAAGGATCGCTTCCTTTAACTCCACCATCTACATGACCATCTTCCCCATTAACAGCGCTCCCGGAGAAGGCCTCGCTTTCGTCATCGCGCCGGATCTGAACATCCCGTCTGGCAGCGACGGTCAATATCTAGGTTTGACCAACGCCACCACCGATGGGAACTCTACTAATCATCTGATCGCGATCGAGTTTGACACCGTGAAACAAGATTTCGACCCAGACAATAACCATGTGGGGCTCAACATCAACAGCATCCGATCCACGAAGACGAGATCGCTCACCGATTTCAACCTCAATATTGTCAGCCCAGAAAAGAGTGCGAACAACATCGTCTGGGTCCAATACGATGGCCAGGAGAAGCTTCTGAAAGTGTACTTTCAGGACCCCATATGGGGTGAACCAGTACTGACTGCGAATCTTAATATAAGAGAGTACGTGAAGCAATACTCGTATTTCGGATTCGCTGCTTCGACGGGGAACTTGACTCAGCTGAACAGCGTAGTGAAATGGACTCTGGAGGTGGAGATGCTTGAGAAAGTGAAAAAGCCGACATGGGTGAAGATCGTGGTGGGGGTCGGTGTTGTGGTAATTTGTTTAGCGGCGGGGTCGGGGTATTATTTGCATAAGAGAATTAGGGGTGTGGACGATCCGAATATGTTGGGGGCGTTGAAGAGCTTGCCCGGGATGCCGAGAGAGTTTAGGTTTAAGGATCTGAAGAAGGCAACCAACAATTTCGATGAGAAGCTGAAGCTGGGACAAGGTGGATTCGGTGTAGTCTATAAAGGTGTTTTACCTAAAGACAACATCCAAGTAGCGGTGAAGAAGTTCTCGAGGGAGAACATGAAGGGCAAAGACGATTTCTTGGCTGAGCTTACCATCATTAATCGTCTCCGTCACAAACATCTCGTCCGATTAGTTGGGTGGTGCCACAAAAGCGGGATGCTTCTCTTAGTGTATGATTACATGGTAAATGGTAGCTTGGACAACCACCTCTTTGGTGGGCCCGAGAAGACACTAATCTGGGACCTTCGAAACAAGATCATATCAGATATAGCATCTGCCTTACAATATCTCCACTACGAATACGATCAAAAGGTGGTGCACAGAGACCTCAAAGCCAGCAACATCATGCTCGACTCTGACTTCAACGCGCGCTTAGGCGACTTTGGCCTTGCACGAGCCCTCGACAACGAGAAGACCTCGTACGCCGAGCTCGGAGGGGTACCCGGCACCATGGGCTACATAGCGCCGGAATGTATCCTCACCGGAAAGGCTACGCGGGATTCTGACGTGTTTGGTTTCGGCGCAGTTGTGCTCGAGGTCGTGTGCGGTAAGCGCCCGTGGTCCAAGATTGTGGGATTCCAGTTCTTGGTTGATTGGGTGTGGATGTTGCATCGAGAAGGCCGGATTTTAGAGGCGATTGATGAGAGGCTGGGGGGTAACTACGAGGTTGAAGAAGCAGAGAGGCTTCTGCTTCTCGGGTTAGCGTGTTCGCATCCTGTAGCGAAGGATAGGCCCAAAACACAAGATATACATCTGATCATTTCAGGATCTGTGCCCGTACCTTACGTCCCACCGTTCAAGCCAGCTTTTGTGTGGCCGGGGACTATGATGGGGCCCACAGAGGACGGGTCTGTGGTAAACACAGCAGATACAATGCCCATGACATCGTCCTATTATGTTGGAAGGTAA 1980 0.498 MFHEMGLPEKLTLLYLLVFPAISMASNLKIYSHQFGPFHSSDYDTFSVLPDATISNKALQILPDSANKDSSLKNKSGRIMLSKSFKLWEGEINSTSERIASFNSTIYMTIFPINSAPGEGLAFVIAPDLNIPSGSDGQYLGLTNATTDGNSTNHLIAIEFDTVKQDFDPDNNHVGLNINSIRSTKTRSLTDFNLNIVSPEKSANNIVWVQYDGQEKLLKVYFQDPIWGEPVLTANLNIREYVKQYSYFGFAASTGNLTQLNSVVKWTLEVEMLEKVKKPTWVKIVVGVGVVVICLAAGSGYYLHKRIRGVDDPNMLGALKSLPGMPREFRFKDLKKATNNFDEKLKLGQGGFGVVYKGVLPKDNIQVAVKKFSRENMKGKDDFLAELTIINRLRHKHLVRLVGWCHKSGMLLLVYDYMVNGSLDNHLFGGPEKTLIWDLRNKIISDIASALQYLHYEYDQKVVHRDLKASNIMLDSDFNARLGDFGLARALDNEKTSYAELGGVPGTMGYIAPECILTGKATRDSDVFGFGAVVLEVVCGKRPWSKIVGFQFLVDWVWMLHREGRILEAIDERLGGNYEVEEAERLLLLGLACSHPVAKDRPKTQDIHLIISGSVPVPYVPPFKPAFVWPGTMMGPTEDGSVVNTADTMPMTSSYYVGR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02553 659 Pfam Protein kinase domain 343 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02553 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Eupl03g02553 659 SUPERFAMILY Protein kinase-like (PK-like) 322 608 IPR011009 -
Eupl03g02553 659 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Eupl03g02553 659 SMART serkin_6 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02553 659 Gene3D - 30 283 - -
Eupl03g02553 659 ProSiteProfiles Protein kinase domain profile. 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02553 659 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Eupl03g02553 659 PANTHER - 64 615 - -
Eupl03g02553 659 CDD STKc_IRAK 347 603 - -
Eupl03g02553 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 272 IPR013320 -
Eupl03g02553 659 FunFam probable L-type lectin-domain containing receptor kinase S.5 326 417 - -
Eupl03g02553 659 Gene3D Transferase(Phosphotransferase) domain 1 418 614 - -
Eupl03g02553 659 FunFam probable L-type lectin-domain containing receptor kinase S.5 418 616 - -
Eupl03g02553 659 CDD lectin_legume_LecRK_Arcelin_ConA 37 272 IPR001220 GO:0030246
Eupl03g02553 659 Pfam Legume lectin domain 34 275 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02553 Eupl-Chr3 58003372 58007509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02553 5 627 Receptor kinase-like Gene Family AT5G55830 35.661 8.52e-119 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl03g02553 Pkinase 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02553 - - msin:131222312 821.231