Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02552 ATGGATCTGCCGAAAAAGCTCGTAATAATATTCCTCCTGCTTTTTCCGACGATATCCGCAGCCCAAAACCTAAAAACCGCCCAGCGCCTCTTCGGCCCCTTCAACAACTCGCATTACGATACCTTTTCCGTCCATCAACCTGCGACCATCAGCAATAATGCTCTTCAAATCACTCCCGACTCTGCAAACGATGCCTTCATCCTAAAACACAAATCCGGCCGAGCCATGCTCTTAGAGGATTTCAAGCTATGGGAAGGAGAGGTCAACTCTACTTCTGAAAGGATCGCCTCCTTCAACTCCTCCTTCTTAATAAACATCTATCCCGTCTCTACCAGCGCCCCGGCCACCCCGGGCGAAGGCTTGGCTTTCATCATCGCACCCGACCTAAACGTCCCGTCCGGGAGTGACGGTCAATATTTAGGTTTGACCAACGCCACCACCGATGGGAACTCTACCAACCAGCTGATTGCAATCGAGCTCGACACCGTCAAGCAGGATTTCGACCCGGACAATAACCATATGGGTCTGAACATTAACAGCATCCGATCCACCAAGGCGGTTTCGATGTCCGATTATGGTATCGAAATTGCCCCTGTGAAAGCAACAAAATACATGGTCTGGATCGAGTACGACGGGCAGAAGAAGGTTCTGAAAGCGTACATGGCCGGAGAAGGTGAGTCCAGGCCCACGAAACCAGTCCTGAATGAGAGTTTAAATTTAAGAACTTACGTGAAGCAGCAATCGTATTTCGGATTCGCTGGCTCAACGGGGAACTTGACTGAGCTGAACTGCGTGCTGGAATGGAATCTGACGGTGGAGATTCTTCCACAAGAGAAAGATCAGACGTCGTTGAAGATCGGTTTAGGTGTGGGTATCCCTGGAGTGGCATTGTTAATACTGTGTGTGGGTGGGATATTGTTTTATTTGCATAAGAGGAGGGCTGTTGATGACCCGAATATATTGGGAGCGTTGAAGAGCTTGCCAGGGACGCCGAGGGAGTTCAGCTTCAAGGATCTGAAGAAGGCGACTAACAATTTCGATGAGAAGCTGAAGCTGGGACAAGGCGGATTCGGTGTAGTTTATAAAGGTGTGTTACCCAAAGAGAATATTGAAGTAGCGGTGAAGAAATTCTCGAGGGAGAACATGAAGGGCAAAGATGATTTCTTGGCCGAGCTTACCATCATTAATCGTCTCCGTCACAAACATCTCGTCCCTTTACTTGGGTGGTGCCACAAGAACGGCATGCTTCTCTTAGTGTACGACTACATGCCAAACGGCAGCCTTGACAAGCACCTCTTCGGTAAAGAAGAGAAGACCCTAAGCTGGGACCGTCGATACAGGGTCATATCAGGTGTAGCATCCGCGCTTCACTACCTCCACAACGAATATGATCAAAAGGTCGTGCACCGCGACCTCAAGGCCAGCAACGTTATGCTTGACTCCGACTACAATGCGCGCTTGGGTGATTTTGGCCTCGCACGTGCCTTGGATAACGAGAAGACCTCCTACGCCGAACTCACAGGGGTCCCCGGCACCATGGGCTACATTGCTCCTGAATGTTTCCACACCGGAAAGGCCACGCGGGAGTCAGACTTGTTCGGCTTCGGTGCGATTGTACTCGAGGTCGTGTGTGGTGAACGCCCCTGTACCAAAATCGCCGGTTTCCAGTTCTTGGTTGACTGGGTGTGGACGTTGTATCGCGAAGGGCGCATTTTAGAGGCGGTCGATGAGAGGCTCGGGAATGATTACGTGGTTGAGGAAGCAGAGAGGCTTCTACTTCTTGGGCTAGCGTGTTCGCAACCTATATCGAGTGAGAGGCCTAAAACGCAGGCGATCGTTCAGATAATCTCAGGATCTGTGCCTACACCTTATGTCCCACCTTTCAAGCCGCCTTTTGTGTGGCCCATGATGGAGCCCATGGATGACAGCACCATGGGCAGCACAGCAGATACGACGCCCATGACATCTTCCTATTACGGTGGATCGGGTTGGACCCCACAGTGCGTCAGCCGGGAGAGCTACTCCGGATACAACGATTCTGCGGTTTAG 2049 0.5115 MDLPKKLVIIFLLLFPTISAAQNLKTAQRLFGPFNNSHYDTFSVHQPATISNNALQITPDSANDAFILKHKSGRAMLLEDFKLWEGEVNSTSERIASFNSSFLINIYPVSTSAPATPGEGLAFIIAPDLNVPSGSDGQYLGLTNATTDGNSTNQLIAIELDTVKQDFDPDNNHMGLNINSIRSTKAVSMSDYGIEIAPVKATKYMVWIEYDGQKKVLKAYMAGEGESRPTKPVLNESLNLRTYVKQQSYFGFAGSTGNLTELNCVLEWNLTVEILPQEKDQTSLKIGLGVGIPGVALLILCVGGILFYLHKRRAVDDPNILGALKSLPGTPREFSFKDLKKATNNFDEKLKLGQGGFGVVYKGVLPKENIEVAVKKFSRENMKGKDDFLAELTIINRLRHKHLVPLLGWCHKNGMLLLVYDYMPNGSLDKHLFGKEEKTLSWDRRYRVISGVASALHYLHNEYDQKVVHRDLKASNVMLDSDYNARLGDFGLARALDNEKTSYAELTGVPGTMGYIAPECFHTGKATRESDLFGFGAIVLEVVCGERPCTKIAGFQFLVDWVWTLYREGRILEAVDERLGNDYVVEEAERLLLLGLACSQPISSERPKTQAIVQIISGSVPTPYVPPFKPPFVWPMMEPMDDSTMGSTADTTPMTSSYYGGSGWTPQCVSRESYSGYNDSAV* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02552 682 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02552 682 SMART serkin_6 346 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02552 682 Gene3D - 30 286 - -
Eupl03g02552 682 SUPERFAMILY Protein kinase-like (PK-like) 328 648 IPR011009 -
Eupl03g02552 682 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Eupl03g02552 682 CDD STKc_IRAK 352 616 - -
Eupl03g02552 682 ProSitePatterns Protein kinases ATP-binding region signature. 352 376 IPR017441 GO:0005524
Eupl03g02552 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 280 IPR013320 -
Eupl03g02552 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Eupl03g02552 682 PANTHER - 49 627 - -
Eupl03g02552 682 FunFam probable L-type lectin-domain containing receptor kinase S.5 331 422 - -
Eupl03g02552 682 Pfam Protein kinase domain 348 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02552 682 Pfam Legume lectin domain 34 283 IPR001220 GO:0030246
Eupl03g02552 682 FunFam probable L-type lectin-domain containing receptor kinase S.5 423 621 - -
Eupl03g02552 682 CDD lectin_legume_LecRK_Arcelin_ConA 39 272 IPR001220 GO:0030246
Eupl03g02552 682 Gene3D Transferase(Phosphotransferase) domain 1 423 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02552 Eupl-Chr3 57964682 57968877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02552 18 628 Receptor kinase-like Gene Family AT3G53810 36.850 1.53e-129 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl03g02552 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02552 - - vvi:100251677 906.36