Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02547 ATGAAGACCCTAACAGTTTCCTCCGCACTGCTTCTGTTTCTGTTGGGCTGCTTCTTTCATTCTTCGGAAGCAAGTTTCCCTCAACACCCTCCTCCTAATTGCCAAAGAAAGTGCGGTAACGTGACTATCAGTTTCCCATTCGGAATTGATGGACAACCAAATTGTTCTCTACCAGGGTTCGAGGTGAGTTGCAATAACGGCGTCCCAACCTTAGTAAATGCTACAGCAGATCTTGAAATTATCAAGATCGTGTATCCCGACCAAGTCTGGCTGCAGAGCAATGAAATAATGGTGTACGACTGTAAAGATGGCAACGGTGAACTGATCAAAAAGAGGAGTACTAGTGTGAATTTGGATTACCCGTTCACGATCTCCGGCGTATGGAACCGCTTTGTCTCCCTGGGTTGCGACACCAAGGCTGATGTTAGTACCGACAACAAAACATTCTCCGGTACGTGCGCGTCACAGTGGAGACAGGACTCGCGTGGGTCGAAATCGAAACACGGCGGACTTGGCCACTGCCAGAGCTCGATACCCAGTGGCTATTCTAAGTTGTTCTACAACGTCACCAACATCTACAATTACAATATAACCTCGTGTGTGAACAAGTGCAGCTATGCGGTCGTGATTCAAGAAGGCTACAATTTCACTGAGCTGCAGCTCAACGACACTCAAATTAAACTTCCTTTGGTTGCCGACTGGGCAATCGACACCGTAGAAACATGCCCCAAGGATACTATATGTGGGGACAACACCGACTGCACGAAGTCGCGGAGGGGTAGGGGTTATCTCTGCACATGCAAAAACGATAATAAAGGGAACCCTTATCTCAGCGGAAAAGAAGGATGCCGAGATAAAAGCTTCCCGGCACTGCCCGTTGCCATAGCTGGTGGTCTTGCCTTAGCGGCGACACTTACAGCTGGTTCTTGGGCGTATGATTCCATGAATCAAAAGAAGCTCATTGAGCTCGGGAAAAAAATGGCTACACTTAACGGAGAAGAATATTTACAAAATCATCCTCCAGATACTGGTGGTCCTGGAGATACTGGTGGTCCTCCCGACCCTAGTAGTGGTGATCCTGGAGATACGGGTGGTGCTACGGAGCCTACTGCTCCTGAAGATTTCACAGATCAAGGAAATGTTGGCGATCAAAATAGCAGCGTTGCTTCAGAGAACCCACGGACGTTCACTTCAGAACAGATTCAAAAGGCAGTCAGAGCCTTTGAAAAAAGCCGAGGCCTTGTTAAGGGAATGATCCAAGGTAGAGTTCGTGTAGCAACACTACCAGAACAGAATAAAAAAGTGAGTATCAGAGATTTTGAAATTGAGGATAAGGGTCAGAGAGAACTCATCAAATCGTTCATGCAAGAGGTCCGGACTATTACCCGAATCAACCATAGTAATGTTGCCAAACTCCTGGGTTGTTGCCTACAAACCACGGTTCCCTCACTGGTTTACGAGTACTTTTCTGATCAAACCCTATTCGACCACATCCACAACAGTGCTGATCATTTGCCATGGGAACACCGACTAAGAATTGCGACGGAGACATCCAAATTGCTTGCTGGTCTGCACTTGCGCAAAAACAAAATATTGCACATGGATGTGAAGTCGAGCAATATACTATTGGACAAGGACTACAATGCCAAAGTAGTTGAATTTGGAGTGGCAAGACTACTCCATACCCTCACACATATGAATAGGAGTATCGGGTATGTTGATCCTGAATATTGCCATTCAAACAAGTTAACCGAAAAGAGCGATGTTTATAGCTTCGGTGTGGTTCTGATTGAGCTTTTAACTGGGAAAAATCCAAGCTCGAAGGACTACCAAATAGGAAATACCCTAGCTATGCACTTCATTTCAGAGATGGAAAACAACGGTCTCGAGCAGGTCCTAGACGCCCAAATACAGAATGAAACGAGTATAGAGGAATTAAAATCCGTTGCAGATCTAGCGGTGAAATGTGTACAATTAAGGGGGGAGGAAAGACCGACGATGAAAGAGGTGGCAGCTACTCTGTCTTCTGGAATACCTGAGGAGCAGGAACAAGTGGAGGAAGAACCTACAAGAGATGGTGGAGAGGACGGGGAAGAGGGTGGGGGGGAAATGCAGGAATTAAAAACTATAGTGGTGGACCAAATACGTAATGATGAATCTACGCAGGCAGCCAAGACAGAGCTAACAGAGCAGGGGTCAGGGATGCTCGATCATCTGAAAACTGCAATTAGTGATATTACTGTCGGAATGTGA 2253 0.4629 MKTLTVSSALLLFLLGCFFHSSEASFPQHPPPNCQRKCGNVTISFPFGIDGQPNCSLPGFEVSCNNGVPTLVNATADLEIIKIVYPDQVWLQSNEIMVYDCKDGNGELIKKRSTSVNLDYPFTISGVWNRFVSLGCDTKADVSTDNKTFSGTCASQWRQDSRGSKSKHGGLGHCQSSIPSGYSKLFYNVTNIYNYNITSCVNKCSYAVVIQEGYNFTELQLNDTQIKLPLVADWAIDTVETCPKDTICGDNTDCTKSRRGRGYLCTCKNDNKGNPYLSGKEGCRDKSFPALPVAIAGGLALAATLTAGSWAYDSMNQKKLIELGKKMATLNGEEYLQNHPPDTGGPGDTGGPPDPSSGDPGDTGGATEPTAPEDFTDQGNVGDQNSSVASENPRTFTSEQIQKAVRAFEKSRGLVKGMIQGRVRVATLPEQNKKVSIRDFEIEDKGQRELIKSFMQEVRTITRINHSNVAKLLGCCLQTTVPSLVYEYFSDQTLFDHIHNSADHLPWEHRLRIATETSKLLAGLHLRKNKILHMDVKSSNILLDKDYNAKVVEFGVARLLHTLTHMNRSIGYVDPEYCHSNKLTEKSDVYSFGVVLIELLTGKNPSSKDYQIGNTLAMHFISEMENNGLEQVLDAQIQNETSIEELKSVADLAVKCVQLRGEERPTMKEVAATLSSGIPEEQEQVEEEPTRDGGEDGEEGGGEMQELKTIVVDQIRNDESTQAAKTELTEQGSGMLDHLKTAISDITVGM* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02547 750 SMART serkin_6 408 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02547 750 Gene3D Phosphorylase Kinase; domain 1 379 488 - -
Eupl03g02547 750 Gene3D Transferase(Phosphotransferase) domain 1 490 695 - -
Eupl03g02547 750 Pfam Protein kinase domain 421 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02547 750 ProSiteProfiles Protein kinase domain profile. 408 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02547 750 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Eupl03g02547 750 SUPERFAMILY Protein kinase-like (PK-like) 388 674 IPR011009 -
Eupl03g02547 750 MobiDBLite consensus disorder prediction 373 398 - -
Eupl03g02547 750 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 684 IPR045274 GO:0007166
Eupl03g02547 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Eupl03g02547 750 Pfam Wall-associated receptor kinase galacturonan-binding 34 91 IPR025287 GO:0030247
Eupl03g02547 750 MobiDBLite consensus disorder prediction 675 704 - -
Eupl03g02547 750 MobiDBLite consensus disorder prediction 334 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02547 Eupl-Chr3 57885277 57889705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02547 12 685 Receptor kinase-like Gene Family AT1G21250 29.879 2.19e-77 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl03g02547 Pkinase 8.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02547 - - msin:131249633 447.973