Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02546 ATGAAGACCCTAACAGTTTCCTCCGCACTGCTTCTGTTTCTGTTGGGCTGCTTCTTTCATTCTTCGGAAGCGAGTGTCCCTCCTGCTAATTGCACAAGAAAGTGCGGTAACGTGACTATTAGTTTCCCATTCGGAATTGATAGACAAGCAAATTGTTCTCTACCAGGGTTCGAGGTGAGTTGCAATAACAACGTTCCAACCTTAAACAATGCATCAGGATTTGAAATTATCAAGATCGTGAATCCCGACCAAGTCTGGCTACAGACCAATACAGCGATGGTGTACGACTGTCAAAATGGCACCGCTGGCTCTGATAAACTCAACAACAGCGTTTGTGTGGAGTTGGGGTACCCATTCACGATCTCCGGCGTGGGGAATCGCTTCGTCTCCTTGGGTTGCGACACAAGGGCTGATATTAACGACAACGAAACATTCGCAAGTACGTGCGAGTCCCAGTGGTTACAGGAATCGCGTAGGTCGAAATCGAAACACGGCGGACTTGGCCACTGCCAGAGCTCGATATCCAGTGGCTCTAATAAGTTCTGCTACAACGTCACCAACTTCTACCGTTACAATAAGAGCTCGTGTGTGAACAAGTGCAGCTATGCGGACGTGGTTCAAGAAGGCTACAATTTCACTGAGGCGCAGCTCAAGGACACTAAAATCAAACGTCCTTTGGTTGCCGATTGGGCAATCGACAACGTAACAACATGCCCCAAGCAAATTCTCTGTGGGGAGCACACCAACTGCAATAATTCGCGGAGGGGTTTTGGTTATCTCTGCACATGCAAAAGCGGTAATAAAGGGAATCCCTATCTCAACGGAAAAGATGGATGCCGAGGTGAAGGCTTCAAGAATGTTCTGCCCATTGCCCTAGCTGGTGGTTTTGCCTTAGCGGCGACACTTGCAGCTGCTTCATGGGGGTATGGGTCCTCGGCTCAAAAGAAGATCAGTCTCCTCAAACAAGCAACCGACAATGGAAGCAAAATTTTACAAGAATTGATCAATAACGGTGGTGATGGTGATCCTTCTGCTGGAGATACGGGTGGTCCTACCGAGTCTACTGCTCCTGAAGATATCCAGGCGAATAACACAGAACAAGGAATTGTTGACGGTGGAAGTAGCAGCGCTGCTGCAGAGAACCCAAAGATTTTCAATTCAGAACAGATTCAACAGGCAGTCAAACTCTTTCAAAAAAGTCAAAACCTTGGTAGGAGAATGCTTCAAGGTAGAGTTCGTGTAGGAACATTACCAACCCAGCAAAAAGTAAGTATCAGAGAATTTGAAATTGAAGATAAGAATCAGACACAACTCATCCGATCCTTCATGGTAGATGTCTGTACTTTAACCCAAATCGACCATAGCCTTTATAGGAATGTTGCCAAACTCCTGGGTTGTTGCCTAGAGACCAAGGCACCGTCACTGGTTTACGAGTACTTCTCTGATCAGACCCTATTCGACCATATCCACAACACTGCTCATTTGCCATGGGAACACCGATTAAGAATCGCGGCAAAGACATCGAAATTGCTTGACGATCTACACTCGCACGAAAAAAAGATATTGCACAGGGATTTGAAGTCGAGCAATATACTAGTGGACACGGACTATAATGTGAAAGTAGTTGATTTTGGAGTGGCAAGACTGCTCCATAGCGTCACACATATGAATAGGAGTGTTGGGTACGTGGATCCTGAATATTGCCATACAAGTCAGTTAACCGAAAAGAGCGATGTTTATAGCTTCGGTGTGGTTCTTATTGAGCTTTTAACTGGGAAAGATCCCAGCTCAAAGGACTACCAAATGGGTTCTAGCCTAGCTATGTACTTCATTTCGGAGATGAAGAAGAACCGTCTCAAGGAGGTCCTAGAGGTCCAAATATGGAATGAAGCAAGTGAGCAAGAATTACAAACCGTTGCAGAGCTGGCGGTGAAGTGTGCAGAATTAAAGGGGGAGGAAAGGCCGACGATGAAGGAGGTGGCAAATACTCTATCTTTTGCAATACCTGAGGAGCAGGAACAAGTGGAGGAAGAAACTACAGGAGATGGTGGAGAGGGTTGGGGGGGTGTGAAGGACCAGGTAACAGGATATGTGTCAACGATGATTGAAGAGATGAAAAATGTAGTTGATTCGGGTCCGAATGTGTGA 2148 0.4614 MKTLTVSSALLLFLLGCFFHSSEASVPPANCTRKCGNVTISFPFGIDRQANCSLPGFEVSCNNNVPTLNNASGFEIIKIVNPDQVWLQTNTAMVYDCQNGTAGSDKLNNSVCVELGYPFTISGVGNRFVSLGCDTRADINDNETFASTCESQWLQESRRSKSKHGGLGHCQSSISSGSNKFCYNVTNFYRYNKSSCVNKCSYADVVQEGYNFTEAQLKDTKIKRPLVADWAIDNVTTCPKQILCGEHTNCNNSRRGFGYLCTCKSGNKGNPYLNGKDGCRGEGFKNVLPIALAGGFALAATLAAASWGYGSSAQKKISLLKQATDNGSKILQELINNGGDGDPSAGDTGGPTESTAPEDIQANNTEQGIVDGGSSSAAAENPKIFNSEQIQQAVKLFQKSQNLGRRMLQGRVRVGTLPTQQKVSIREFEIEDKNQTQLIRSFMVDVCTLTQIDHSLYRNVAKLLGCCLETKAPSLVYEYFSDQTLFDHIHNTAHLPWEHRLRIAAKTSKLLDDLHSHEKKILHRDLKSSNILVDTDYNVKVVDFGVARLLHSVTHMNRSVGYVDPEYCHTSQLTEKSDVYSFGVVLIELLTGKDPSSKDYQMGSSLAMYFISEMKKNRLKEVLEVQIWNEASEQELQTVAELAVKCAELKGEERPTMKEVANTLSFAIPEEQEQVEEETTGDGGEGWGGVKDQVTGYVSTMIEEMKNVVDSGPNV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02546 715 ProSiteProfiles Protein kinase domain profile. 397 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02546 715 SMART serkin_6 397 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02546 715 Pfam Wall-associated receptor kinase galacturonan-binding 31 85 IPR025287 GO:0030247
Eupl03g02546 715 Pfam Protein kinase domain 410 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02546 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Eupl03g02546 715 MobiDBLite consensus disorder prediction 334 359 - -
Eupl03g02546 715 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Eupl03g02546 715 Gene3D Phosphorylase Kinase; domain 1 373 479 - -
Eupl03g02546 715 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 673 IPR045274 GO:0007166
Eupl03g02546 715 SUPERFAMILY Protein kinase-like (PK-like) 409 666 IPR011009 -
Eupl03g02546 715 Gene3D Transferase(Phosphotransferase) domain 1 481 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02546 Eupl-Chr3 57852460 57874961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02546 383 664 Receptor kinase-like Gene Family AT1G21230 45.548 1.60e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl03g02546 Pkinase 7.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02546 - - msin:131218894 475.707