Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02544 ATGCGAGTCGTTTCACTGTTATTAGCTCTTCTCATCAAGGGAATCAAGAAGAAAAAAGAAGAGAGGATTGAGGATGAAGAAGAGTACTACTACTTGCGAAACGGAGCAATTTTATTAGAGAAGCATATCTCCTCTTACCAGGGGAAAGGTGAGCCCCTCAGGTTCTTCTCTGCCAAGGACATCAAACGGGCCACCAACAACTACGACAAGCGTCTGATCCTCGGCCAGGCCGTCGCAACTGTTTATAAAGGAATTCTCGACAACCGAACGGTTGCCATTAAAATTCGTCAAGAGCTTCATCCCACTGACGACATTATCGATTTTTTCTTGAACCAGGTCACGACAAAACTTCAAATCAACCACAAAAACGTGGTGAAGCTCTTGGGTTGTTGCTTAGAGACCCAAATTCCCAGCCTGATTTATGAATTCATCCCAAATGGTACTCTCTCCGATCATCTTCACGGTGACGGCAACGTGGGTCCTCGTTGGATTCCATGGCCAGATCGGTTGAGGATCGCTACAGATATTGCATATGTACTTTCTTATATGCACTGCGCTACATCGAAGCCGATCGTGCACAGGGACGTGAAATCCTTGAACATTTTCTTGGATGAGAACTACACAGCTAAGCTATCAAACTTTGGGTTTTCGGTTTCAATTACGCCTGGGAAAGAAATATATGAAGTCGAAGGGAGTTGGGGGTACATCGATCCGGAGCACATAGAGACGCGTCGAGTAACAGAGAAGTGCGATGTTTATGGCTTTGGTGTTGTCCTTGTGGAACTACTGACGGGAAAGAAACCTATCCAACTGTGCGAAGGGGGCATTGATTTAGTGAAACATTTCATATCGTCGATGAAAGAAAATCAGATTTTGCGAGTCGTGGATCATAGAATTTCGGAGGAGGGAAGCATGGATGGAATTCAGGCGTTTGCAGAGCTCGCTTTGTGCTGCGTAGGAGAGAAGGGAGAGACGAGGCCGAGTATGATCAAAGTGGTGAAGGAGCTGAGACGGATAAAAAACATATCGTAG 1032 0.4564 MRVVSLLLALLIKGIKKKKEERIEDEEEYYYLRNGAILLEKHISSYQGKGEPLRFFSAKDIKRATNNYDKRLILGQAVATVYKGILDNRTVAIKIRQELHPTDDIIDFFLNQVTTKLQINHKNVVKLLGCCLETQIPSLIYEFIPNGTLSDHLHGDGNVGPRWIPWPDRLRIATDIAYVLSYMHCATSKPIVHRDVKSLNIFLDENYTAKLSNFGFSVSITPGKEIYEVEGSWGYIDPEHIETRRVTEKCDVYGFGVVLVELLTGKKPIQLCEGGIDLVKHFISSMKENQILRVVDHRISEEGSMDGIQAFAELALCCVGEKGETRPSMIKVVKELRRIKNIS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02544 343 Gene3D Phosphorylase Kinase; domain 1 42 143 - -
Eupl03g02544 343 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 7 340 IPR045274 GO:0007166
Eupl03g02544 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Eupl03g02544 343 Gene3D Transferase(Phosphotransferase) domain 1 144 343 - -
Eupl03g02544 343 ProSiteProfiles Protein kinase domain profile. 41 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02544 343 SUPERFAMILY Protein kinase-like (PK-like) 51 336 IPR011009 -
Eupl03g02544 343 SMART serkin_6 68 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02544 343 Pfam Protein kinase domain 77 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02544 Eupl-Chr3 57831958 57833792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02544 6 341 Receptor kinase-like Gene Family AT1G16130 44.023 9.61e-86 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl03g02544 Pkinase 1.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02544 - - qsu:112009783 355.525