Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02543 ATGTGGCCGTGCTTGAGACCCATGAAAGGTATATTGCTAGAAAATGGATTTAGGAATGGAAGTAAACAAGAACAGTTTTTACAGGACAATGGAGCTCGACTACTAGAGAAGCTAGTTTCTTGTTGTGAAGGGTATGGCAAGCCTATCCGGATCTTCTCTGCAATAGAGCTCGAAAAGGCGACAGACAACTATTCTCGAAATCGAATTTTATTTAAGAGTGGCAATAGTATCACTTACATTGGAATCCATGATAATAGTAAGGTTACAATAAAGAAGCACAGGGTTGGAGGGGGATTGCGGCGATTGCCTCGTGCCCGAGTTGTGGACCTATATATAAACGAAGCTGCCATACTCTCACGAATTAACCACAAGAATGTGTTGAAGCTCTTGGGCTGCTGCTTAGAGACTGAAATTCCCATTCTGGTTTATGAATTTGCCTCCAATGAATATCTTTCCAAATACAAACACAATGAGTTGCATTCAGATACCTCAGTAATACCATGGGAGAGTAGGTTGAGGATCGCCACAGAAATGGCAGACGCAATTTCCTATCTACACATAGCAACTTCCGAGCCCATTATCCACAGGAATATAAAGACCAGTAATATTTTCTTAGATGGGAATCATTCTGCCAAACTATGTGGTTTTGGATACTCCACGCTGATCCCCTCAGGTGAAACTTATGTGGAATCGAATGGGGTGAGAAGTGCTTCTAAATTCGCGGCTCCTGAATATATATCTACAAGGAAATATACAGAGAAGAGTGATGTTTACAGCTTTGGAATGGTGTTGCTAGAGATTTTCACTGAAAGGAGGGTTTCTGATGCTATATTGAAGTACTTGCCAAGTCATTTCTATTTGGATGAGGGCACTAGCACTGTGGATGACGAGGAGGGTCTTCACCAGTTTTTGAAGGCCTACGTTTTGAATGCGCTGAGAACGATGCAGGAGGTAGCATGCGCAGAGCTTGCCTTGAGATGCCTCAAATTTAATTGGGAAGAAAGGCCAACAATGAAAGAAGTAGCACTAGAGCTCCGGCGGGTAAAAAGGGTCCAAAGCTCCACGTTAGGAGACGATAGGCAACTTGAGAGAGCTAACCCTCTGTTGGTTGCTTGTTAA 1119 0.4298 MWPCLRPMKGILLENGFRNGSKQEQFLQDNGARLLEKLVSCCEGYGKPIRIFSAIELEKATDNYSRNRILFKSGNSITYIGIHDNSKVTIKKHRVGGGLRRLPRARVVDLYINEAAILSRINHKNVLKLLGCCLETEIPILVYEFASNEYLSKYKHNELHSDTSVIPWESRLRIATEMADAISYLHIATSEPIIHRNIKTSNIFLDGNHSAKLCGFGYSTLIPSGETYVESNGVRSASKFAAPEYISTRKYTEKSDVYSFGMVLLEIFTERRVSDAILKYLPSHFYLDEGTSTVDDEEGLHQFLKAYVLNALRTMQEVACAELALRCLKFNWEERPTMKEVALELRRVKRVQSSTLGDDRQLERANPLLVAC* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02543 372 Gene3D Transferase(Phosphotransferase) domain 1 148 365 - -
Eupl03g02543 372 Gene3D Phosphorylase Kinase; domain 1 37 145 - -
Eupl03g02543 372 ProSiteProfiles Protein kinase domain profile. 64 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02543 372 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 350 IPR045274 GO:0007166
Eupl03g02543 372 SUPERFAMILY Protein kinase-like (PK-like) 47 343 IPR011009 -
Eupl03g02543 372 Pfam Protein tyrosine and serine/threonine kinase 111 343 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02543 Eupl-Chr3 57822682 57826717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02543 18 352 Receptor kinase-like Gene Family AT1G21230 40.580 2.53e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl03g02543 PK_Tyr_Ser-Thr 1.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02543 - - ming:122061088 271.166