Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02528 ATGGAGTTCGAACCTTTGAACATGGAAAACGAGGTGATGGAATTCGACATCGGCTCCGGTGAAGACGACGACGCCGGTGTCGACGTTGAACACCCCGAAGACGACGAAGAGTACGACGATGATATGCTCGAAGGCTCCGATGGACGAGACTTCTTCGGTTCGGACGCAGACCCCAATCTTGAACCGTTCGAGGGCATGGAATTCGAATCTGAAGAGGCTGCCCGGATTTTCTACAATTCGTATGCCCGCCGCGTAGGATTCAGTACCCGGGTCAGTGTCTACCACCGCTCCCGTCGCGACGGTGCGATAATTTGCCGCAAGATCGTGTGCTCCCGACAAGGTTTTCGTGACGGTAGTGGCAGCAAAAGCAGGGCCAAGCGTCCGCGAGCAGTTACTCGGGTTGGTTGCAAGGCTATGATCATGGTGAAGAAACAAGATTTGGGGAAATGGACAGTGTCAAAATTTGTGAAAGAACACAATCACGAGCTCGTGCCACCTGATAAAGTGCATTGCCTCCGATCGCATAGGTATGTATCAGGTCCTGCCCGAAGCCTGATTGATACTCTTCAAGCTGCAGGTATAGGTCCGAGTGGGGTAATGTCGGTTTTAATAAAGGAATCTGGTGGGATTAACAATGTCGGGTTTACTACTGTGGACTGCCGGAATTACATGAGTAGTAGCCGGCAGAGGACTCTTGGGAGCGGGGGTCAGCAGGTTTTGGATTATCTAAAGCAAATGCAAGCAGAGAATCCCGGTTTCTTCTATGCAATCCAAGGCGAAATTGAGCACTCAGCAGGGAACATATTCTGGGCCGATGCGAGTTGTAGGATGAATTATAACTATTTTGGGGACACGGTTACATTTGACACAACATACAGGACGAACAGGTATAGGGTCCCGTTTGCCCCGTTCACTGGGTTGAATCATCATGGCCAGCCCGTGCTATTTGGTTGTGCGTTACTTCTCAATGAGTCAGAGGCTTCGTTCATTTGGCTATTTGAAACTTGGCTTGCAGCAATGTCTGGACGCCATCCGGTGTCGATCACAACTGACCAGGATAGGGTCATACGGACAGCTGTCGCACATGTGTTTCCTGATACCCGCCATCGTTTTTGCAAGTGGAACATATTTAGGGAAGCCCAAGAGAAGTTGTCTACTGCATATCAATCACACCCGGCTTTTGAAGCAGAATTTCGTAAGTGCATCAACATGACTGAGACAATTGATGAGTTTGAGTCATGTTGGGAGTCACTCCTTGAAAGATACAATCTTGTGGACAATGAATGGCTCCAGTCAATGTACCTCACGCGCCAGCAATGGGTCCCGGTGTACCTGCGGGATACATTCTTTGGTGAGATGTCCATAACCCAAGGGAGTGATAGTATAAACTCATATTTTGATGGGTATGTGAACGCATCAACCACTATACAGGTGCTGGTTAAGCAGTATGAGAAAGCCGTAGCAAGTCGGCACGAAAAGGAAGTAAAAGCGGATTATGATACAATAAACACAGCACCAGTTCTGAAGACCCCTTCTCCTGTGGAAAAACAAGCAGCAAGCCTTTATACAAGGAGAATTTTCATGAAATTCCAAGAAGAATTAGTAGAAACCCTTGCTATTACTGCAACTAAAATCGAGGATACTGGGACAGTCACAACTTATAGGGTGGCAAAATTTGGGGAAGACCACAAGGCATACATTGTTAGGTTCCATGTTTTTGAAATGAAAGCGAATTGTAGCTGCCAAATGTTTGAGTTTTCAGGCATTATCTGTAGGCACATACTAGCAGTCTTCAAAGTAACAAATGTTCTTACACTCCCTTCTCATTATGTTTTGAAACGTTGGACGAGAAATGCCAAGAGTGGGATCATAGTGGATGAACGTGCTCTTGAATTGCCAAGTAATTCTCGAGAGTCTTCAACGTACCGTTTTAACAATCTACGCCAGGAAGCCATCAAATATGTAGAGGAAGGGGCAAAGTCTTCACATATTTATAACGTGGCAATGGATGCTCTAAAAGAGGCATCAAAGAAGGTCTCTGCCGCAAAAAGCCATGGTCCTGGAGTAGCTCAGGTTGGAACTCTGGTCAATGGAAGCAATAGGGAAGTACATGCCAGTGAAGGAAGCCGATTGGGCCCACTTCTGTCTTGCTCCGCGGATGAGAAGGACAAGAAAATTCTGGAATTAATGAATGAAGTGGACAGTACGAATCAACGATGTGAAGTGTATCGAGCAAATCTGCTTGCAGTTTTGAAAGATATGGAGGAACAAAAGCTAAAGCTGTCTGTTAAAGTTCAAAACGTGAGGCTTAGCTTGAAAGATTGA 2325 0.4637 MEFEPLNMENEVMEFDIGSGEDDDAGVDVEHPEDDEEYDDDMLEGSDGRDFFGSDADPNLEPFEGMEFESEEAARIFYNSYARRVGFSTRVSVYHRSRRDGAIICRKIVCSRQGFRDGSGSKSRAKRPRAVTRVGCKAMIMVKKQDLGKWTVSKFVKEHNHELVPPDKVHCLRSHRYVSGPARSLIDTLQAAGIGPSGVMSVLIKESGGINNVGFTTVDCRNYMSSSRQRTLGSGGQQVLDYLKQMQAENPGFFYAIQGEIEHSAGNIFWADASCRMNYNYFGDTVTFDTTYRTNRYRVPFAPFTGLNHHGQPVLFGCALLLNESEASFIWLFETWLAAMSGRHPVSITTDQDRVIRTAVAHVFPDTRHRFCKWNIFREAQEKLSTAYQSHPAFEAEFRKCINMTETIDEFESCWESLLERYNLVDNEWLQSMYLTRQQWVPVYLRDTFFGEMSITQGSDSINSYFDGYVNASTTIQVLVKQYEKAVASRHEKEVKADYDTINTAPVLKTPSPVEKQAASLYTRRIFMKFQEELVETLAITATKIEDTGTVTTYRVAKFGEDHKAYIVRFHVFEMKANCSCQMFEFSGIICRHILAVFKVTNVLTLPSHYVLKRWTRNAKSGIIVDERALELPSNSRESSTYRFNNLRQEAIKYVEEGAKSSHIYNVAMDALKEASKKVSAAKSHGPGVAQVGTLVNGSNREVHASEGSRLGPLLSCSADEKDKKILELMNEVDSTNQRCEVYRANLLAVLKDMEEQKLKLSVKVQNVRLSLKD* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02528 774 MobiDBLite consensus disorder prediction 1 47 - -
Eupl03g02528 774 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Eupl03g02528 774 Pfam SWIM zinc finger 554 599 IPR007527 GO:0008270
Eupl03g02528 774 Coils Coil 719 746 - -
Eupl03g02528 774 SMART 26again6 577 604 IPR006564 GO:0008270
Eupl03g02528 774 MobiDBLite consensus disorder prediction 1 44 - -
Eupl03g02528 774 ProSiteProfiles Zinc finger SWIM-type profile. 566 602 IPR007527 GO:0008270
Eupl03g02528 774 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 680 IPR031052 GO:0006355
Eupl03g02528 774 Pfam MULE transposase domain 286 377 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02528 Eupl-Chr3 57605492 57651393 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl03g02528 MULE 9.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02528 - - psom:113283573 1268.06