Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02512 ATGGAGGGCTTGGAACCCGGTCCAGGTTCTCGCTACGTCCATCAGCTCATTAGACCGGAACTGGACTTACAACGATCATCACAACCACAGAACCAAACAACCCAAATGTCAGATTCCAAAGATTCGCCGGAGAAAGAGCAGAAACTCGACACGGACGCAGCCACGACTAGCTCTGGTGCTGTAGCCGCCGCCAACCGTCGGACCCGTGGTCGCCCCGCTGGCTCAAAGAACAAGCCCAAGCCACCAATAATCGTCACTCGAGACAGCCCAAACGCACTCAGAGCGCACGTGCTTGAAGTATCGACTGGTGCAGACATCGTCGAGTGCGTGTCAAATTACGGAAGACGCCGGGGCCGGGGAGTCTGCGTTTTCAGCGGCAGCGGAACAGTCGTTAATGTCACATTGCGTCAACCGGCGACACCACCAGGGAGCGTCGTCACACTGCACGGCCGGTTCGAGATAATGTCTCTGTCGGGTACTGTACTTCCACCTCCGGCACCACCAGGCGCAGGCGGGCTGACAATATTTTTGTCCGGAGGGCAAGGACAGGTAGTTGGGGGAAGTGTTGTGGGACCCTTGGTAGCGTCAGGTCCAGTGATGTTGATGGCTGCTTCGTTCGGGAACGCGGTGTTTGAACGGTTACCAATGGAGGAGGAGTCACCGGTGCAGGTCCAGCCTACAGCTTCACAATCCTCAGGTGTTACAGGCGGCGGCGGTGGTGGACAATTGGGTGAGGGTGGTGGTGGTAGCGGCGGCGGCGGCGGTGGTAGTGGTAGTGGTGTTTCTTTTTATAATTTGGGAATGAACATGGGGAATTATCAGTTTCCTGGAGATGTATATGGTTGGGGTGGTAATGCTTCCAGGCCTCCCTTTTGA 876 0.5628 MEGLEPGPGSRYVHQLIRPELDLQRSSQPQNQTTQMSDSKDSPEKEQKLDTDAATTSSGAVAAANRRTRGRPAGSKNKPKPPIIVTRDSPNALRAHVLEVSTGADIVECVSNYGRRRGRGVCVFSGSGTVVNVTLRQPATPPGSVVTLHGRFEIMSLSGTVLPPPAPPGAGGLTIFLSGGQGQVVGGSVVGPLVASGPVMLMAASFGNAVFERLPMEEESPVQVQPTASQSSGVTGGGGGGQLGEGGGGSGGGGGGSGSGVSFYNLGMNMGNYQFPGDVYGWGGNASRPPF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02512 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 254 IPR014476 GO:0003680
Eupl03g02512 291 MobiDBLite consensus disorder prediction 222 237 - -
Eupl03g02512 291 PIRSF ESCAROLA 11 291 IPR014476 GO:0003680
Eupl03g02512 291 CDD DUF296 94 162 IPR005175 -
Eupl03g02512 291 ProSiteProfiles PPC domain profile profile. 90 228 IPR005175 -
Eupl03g02512 291 MobiDBLite consensus disorder prediction 217 255 - -
Eupl03g02512 291 MobiDBLite consensus disorder prediction 1 86 - -
Eupl03g02512 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Eupl03g02512 291 FunFam AT-hook motif nuclear-localized protein 93 222 - -
Eupl03g02512 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 223 - -
Eupl03g02512 291 Gene3D - 93 227 - -
Eupl03g02512 291 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02512 Eupl-Chr3 57351599 57352474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02512 5 218 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 59.740 4.72e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02512 - - nnu:104606865 404.06