Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02466 ATGAAACCTTATTCGATCTTCCTTCTCTGGTTTTTGTTGATCGTCGCTGGGTTTTTCACCTCAATCGCCGATTTTCCGAACTCAGAAATTTCCATCTCTAACCCGAATTTGAAGCGCTTCAAGGATCCTGCAGGCAGATCTCTCTTGTCGCTTAATGCTAAACAGGATACAGCTCTTGTAGCTTCCCTGGATGGTACAGTCCATTTAGTGGAGAGTCATTCTGGGAATGTCTTATGGTCGTTCTCATCAGGCTCTTCAATTTATTCCTCATATCAGGCTCTTCCTGATGATGATAAGGAAAATAACTCTGGACTGGGTGGAGGGACGGAACCTTATCTGAACGACAATTACTTTGTAGATATTGGAGATGACTGGAGCTTGTATATGCATAACAAGCACTTTGGTAAAACGAAAGTTCCGATGACAGTGGAAGAATATGTCAGTAGTACACCACACATATCAGAAGATGGAGGAATCACACTTGGGTCAAAGAAAACTACTGTATATCTTGTTGATGCCAGAAGTGGAGCAGTAATTTATGCATATAAATCAGATGATTCTCCCTTGACTTTAGGGGTTCAGAGTGATGGAGAGAAGCCTGTTTTATCTAAGCAAGATACTGAGGACTTCGTAGAGTCCAGTGCCGTGGACCTGAAGACAGTTGAGCCACTTTATATTACGAGGACAGACTATGCACTGCAGTCTTTTGCTCCAAGCTCAGGCAAAGTCTTGTGGAATATGACGGTTGCCGAAATTGGGGCTGCTTTTCTTTGTCAAGGAATTGAAAATTCTTTTAGTGGGGGCGCTTTTAATCTGAGGAATGAGCTTGGTTTGGAATATGAAGGTGATTTTGAAATGCCATTGCCATGCCAAACAAAGGCTATTGTCGCCCGTATTCGTGACCGTAATCTCGTACAATCTTTCTCACAGATTGGTAGATTACCAATGGCTAATAATGAAGGCGAAATGCTCCCTCTACCTGCCCCCGATCGCCACTCGTTACAACCTAAGGTTCATCACCAAGGTGAGTTAGTGCTCCCTCTTCCCCCTCCTAAGATTGAAAACCCTGGGATCTTGGACATTCCCAGTGAAAACAAGAGTCCGCGTTATAGTAATTTGTGGAAATTTGCTTTGGGATTGATCACTTCTCCTAAAATTCTAAGCTATCTTGCTATTTTCTTGCCTCTGGTACTATGGTATATGGGTCTTCTAACAATTACAAGAAAGGACAAGTCTACTAAGCAATTGAATGATTCAAGAGGGACGCTCACTGTAGGTCCCAAAAGGAAGAAAGCTCGGAAACTGGGAAACAATAAGAACAGTGGCAGTACTGAAATGAATGATAAAAATATCTCATCTGAAAAGGAGGGAGTCAAAACTAATGGGATTCCACGCATTGAGAGAAATGATAAAGAACCGTGGTTGGATCTTACAAAACCTGTTGACGGTGGGGTGGATGGACGTAGGGTTGGTAAATTATTTGTATCTAACATCGAAATTGCTAAGGGAAGCAATGGTACTGTTGTCCTTGAGGGAATTTATGATGGCCGTCCAGTTGCTGTCAAACGCCTTGTGCAGGTCCATCATGATGTGGCTTTTAAAGAGATTCAGAATCTTATTGCATCTGATCGGCATTCAAATATTGTTCGATGGTATGGAGTGGAGTATGATTCAGATTTTGTTTATCTTGCACTGGAGCGTTGTAATTGCAGTTTAAATGATTTGATTCAGATGTACTCTGATTCTTCTCCAGACCCAGTATTTACTGAGGGCCAGGGTATGAACTCTATAAACGAGTATAATGTCCGGTTGGATTCAATTAAGGGAATTAACAAGGATATTGAATTATGGAAAGCTAATTGCTATCCTTCACTCCAGTTGTTAAAACTGATGAGGGATGTGGTCTCTGGGCTTGCACATTTGCATGAGTTGGGAATCATACATCGGGACTTAAAGCCTCAAAACGTTTTGATAATCAATGAGAGATCTTTATGTGCAAAACTCTCTGATATGGGTATAAGCAAGCGCCTTCTTGGTGATATGTCTTCCTTGGGTCATCATGCCACTGGTTATGGTAGTTCGGGTTGGCAAGCACCCGAACAACTTCTTCATGGACGCCAAACGCGAGCTGTAGATTTATTTAGTTTAGGCTGTGTTCTCTTCTTCTGCATCACTGGTGGTAAACACCCATTTGGCGATCGTCTTGAACGTGACATAAATATTGTCAAGAACCGGATAGACCTGTTCATGGTGGAGCATATTCCAGAAGCTGTGGATCTTTTCTCTCATTTATTAGATCCCATACCAGAATTGAGGCCAAAAGCAGTGGATGTACTCCACCATCCTCTTTTTTGGAGTTCTGAGATGCGCCTCTCATTTCTTCGAGACACTAGTGACAGGGTGGAACTAGAAGATAGGGAGAATGAATCTGATGTCTTGACAACATTAGAAGATGTTGCGCCAGTTGCTTTGGGTGGGAAATGGGATGAAAAGATGGAAACAGCATTCATCACTAACATTGGCCGTTACAGGCGTTACAAGTATGACAGCACTCGCGATTTGCTGCGTGTCATACGAAACAAGTTTAATCATTACAGAGAACTTCCGAAGGAAATCCAGGAAATTCTTGGACCAGTTCCTGAAGGATTTGATTGCTATTTTGCGAGTCGGTTTCCTCGACTCTTAATTGAAGTGTACAAAGTTGTATACAAATACTGCAGGGACGAGGAATGCTTTTGGAAGTACTTTAAAAGCAATCCGATCTAA 2766 0.4212 MKPYSIFLLWFLLIVAGFFTSIADFPNSEISISNPNLKRFKDPAGRSLLSLNAKQDTALVASLDGTVHLVESHSGNVLWSFSSGSSIYSSYQALPDDDKENNSGLGGGTEPYLNDNYFVDIGDDWSLYMHNKHFGKTKVPMTVEEYVSSTPHISEDGGITLGSKKTTVYLVDARSGAVIYAYKSDDSPLTLGVQSDGEKPVLSKQDTEDFVESSAVDLKTVEPLYITRTDYALQSFAPSSGKVLWNMTVAEIGAAFLCQGIENSFSGGAFNLRNELGLEYEGDFEMPLPCQTKAIVARIRDRNLVQSFSQIGRLPMANNEGEMLPLPAPDRHSLQPKVHHQGELVLPLPPPKIENPGILDIPSENKSPRYSNLWKFALGLITSPKILSYLAIFLPLVLWYMGLLTITRKDKSTKQLNDSRGTLTVGPKRKKARKLGNNKNSGSTEMNDKNISSEKEGVKTNGIPRIERNDKEPWLDLTKPVDGGVDGRRVGKLFVSNIEIAKGSNGTVVLEGIYDGRPVAVKRLVQVHHDVAFKEIQNLIASDRHSNIVRWYGVEYDSDFVYLALERCNCSLNDLIQMYSDSSPDPVFTEGQGMNSINEYNVRLDSIKGINKDIELWKANCYPSLQLLKLMRDVVSGLAHLHELGIIHRDLKPQNVLIINERSLCAKLSDMGISKRLLGDMSSLGHHATGYGSSGWQAPEQLLHGRQTRAVDLFSLGCVLFFCITGGKHPFGDRLERDINIVKNRIDLFMVEHIPEAVDLFSHLLDPIPELRPKAVDVLHHPLFWSSEMRLSFLRDTSDRVELEDRENESDVLTTLEDVAPVALGGKWDEKMETAFITNIGRYRRYKYDSTRDLLRVIRNKFNHYRELPKEIQEILGPVPEGFDCYFASRFPRLLIEVYKVVYKYCRDEECFWKYFKSNPI* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02466 921 PANTHER IRE1-RELATED 138 919 IPR045133 GO:0004521|GO:0004674|GO:0030968
Eupl03g02466 921 MobiDBLite consensus disorder prediction 412 450 - -
Eupl03g02466 921 SUPERFAMILY Protein kinase-like (PK-like) 499 793 IPR011009 -
Eupl03g02466 921 Gene3D - 41 265 IPR015943 GO:0005515
Eupl03g02466 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Eupl03g02466 921 SMART PGNneu 849 903 - -
Eupl03g02466 921 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 610 786 - -
Eupl03g02466 921 SMART serkin_6 494 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02466 921 Gene3D Transferase(Phosphotransferase) domain 1 609 786 - -
Eupl03g02466 921 ProSiteProfiles KEN domain profile. 787 918 IPR010513 GO:0004540|GO:0006397
Eupl03g02466 921 Gene3D Phosphorylase Kinase; domain 1 485 566 - -
Eupl03g02466 921 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 56 246 IPR011047 -
Eupl03g02466 921 SMART ire1_9 51 82 IPR018391 -
Eupl03g02466 921 SMART ire1_9 217 248 IPR018391 -
Eupl03g02466 921 SMART ire1_9 151 183 IPR018391 -
Eupl03g02466 921 Gene3D KEN domain 787 921 IPR038357 -
Eupl03g02466 921 ProSiteProfiles Protein kinase domain profile. 494 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02466 921 Pfam Protein kinase domain 499 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02466 921 CDD RNase_Ire1 788 916 - -
Eupl03g02466 921 FunFam Inositol requiring 1-1 41 266 - -
Eupl03g02466 921 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 486 566 - -
Eupl03g02466 921 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 788 920 - -
Eupl03g02466 921 Pfam Ribonuclease 2-5A 790 916 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02466 Eupl-Chr3 56497248 56504633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02466 520 783 MAP Kinase Kinase Kinase AT3G06030 26.866 1.27e-17 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Eupl03g02466 Pkinase 1.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02466 K08852 - vvi:100249111 1045.8