Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02463 ATGAATCTGGTTTGGCTTCTACTGCTATCGTTTCTCTATTTTGGGATAATCTCAAACGGGGTTTCGAGACCTGATAGTGTGAACATTGGAGCTATTTTCACCTTCGATTCTATCAATGGGAGAGTTTCAAAGATTGCCATGAAGGCTGCTGTGGAAGATGTGAATTCTGATCCCAGTGTTCTCGGTGGAAGGAAACTGGTTCTATCAACGCACGACTCCAATTACAGTGGATTTTTCGGCATTATTGGGGCTTTACAGTACATGGAGACTGATACTGTGGCTATAATTGGCCCACAAAATTCCGTAATGGCTCATGTACTCTCACATCTTGCAAATGAACTCCAAGTCCCGCTGCTGTCTTTCACGGCCACAGACCCCACTCTCTCTGCCCTTCAATACCCCTTCTTTGTGCAGACATCCCCAAGTGATCTGTTCCAGATGGCCGCGATAGCCGAGATGGTTAGTTACTATGGTTGGAGAGAAGTAATTGCGGTCTTCACCGATGATGATCATGGACGAAATGGTATAGCTGCATTAGGCGATAAACTTGCGGAGCGGCGCTGTAAAATTTCTTACAAAGCAGCACTTCCCCCTGACCCTGGAGCAACTCCAGATGAGATTACAGATATACTGGTTAAGGTGGCATTGATGGAGTCGCGGATAATTGTTTTACATACTTACTCCAAATCGGGTCTCATGGTATTTGATGTATCCCAAAAGCTTGGAATGATGGGGAGTGGGTATGTGTGGATAGCTACCACCTGGCTCTCTACTGTTTTGGATTCTACCTCTCCCCTCTCTCCAGCGGTTGCAGATTCAATCCAAGGAGTTCTTACACTGCGTCCACATACACCAGATTCAAAAAGGAAAAGAGCTTTCTCCTCTAGGTGGAGCCAGCTGAGTGATGGCTCTATTGGGTTGAATCCCTATGCTCTATATGCCTATGATACGGTATGGATGCTTGCTTATGCAGTTAAGGCATTCTTTGATCAAGGCAATACCATTTCATTCTCTAATGATTCAAAGTTAAGTGATGTAGCTGGAGGGACTCTGCACCTTGAAGCGATGAGTATTTTTGACGGAGGGAACCAGTTGCTGCACAATATATTGCAAACCAATATGACGGGTCTAACTGGCCCGCTTCGGTTTAATACAGATAGGTCCATCATTCGTCCTGCATTCGATGTGATTAATGTGATTGGAACTGGGTTTCGGCAGGTTGGGTACTGGTCTAATTATTCGGGGTTATCTGTTGTGCCTCCTGAGATGCTCTACGCGAAGCCACCTAACCGTTCGATTTCAAACCAAAAACTATACAGTGTAATCTGGCCCGGGGAAACAACGATAAAACCTCGGGGATGGGTCTTCCCAAACAATGGAAGACAGTTGAGGATTGGAGTCCCTAATCGAGCTAGTTATCGGGAATTTGTCTCACTAGTAAAAGGTACCGATGTGATCAAGGGATACTGCATAGACGTATTTCTTGCTGCCGTAAACTTGCTACCATATGCCGTTCCATATAGGTTCATCCCCTATGGAAACGGTCTGATGAACCCAAGCTACACTGAGCTTGTGACTTCAATCACATCAAATGCTTTTGATGCTGCTGTAGGTGATATCGCGATTGTCACGAACAGAACAAGGATTGTGGATTTTACGCAGCCATATATCGAGTCAGGTTTAGTTGTAGTGGTCAAAGTTAGGAAGCTGAACTCAAGTGCTTGGGCTTTCCTGCGGCCATTTACTCCAATGATGTGGGCTGTCACAGCAGCTTTCTTCCTTGTCGTGGGAGCAGTTGTGTGGATTCTGGAGCATAGGATGAATGATGAGTTCCGGGGCCCTCCTAAAAAACAAGTTGTTACGATTCTATGGTTTAGCTTCTCAACTTTATTTTTTGCCCACAGAGAGAACACAGTGAGCACCCTCGGTCGCTTAGTGTTGATCATATGGCTTTTTGTGGTTTTGATAATCAACTCGAGCTACACTGCAAGTCTGACTTCAATCCTCACGGTGCAACAGCTATCTTCACCCATAAAAGGAATTGAAAGCTTGATAACAAGCACTGAACCTATTGGATTCCAAGTAGGGTCTTTTGCTGAAAACTACTTGAACGAAGAACTCAACATTCCTAAATCTAGACTTGTTGCTCTCGAGTCACCAGAAAAATATGCTATGGCCCTTGAAAGTGGTACTGTTGCTGCTGTGGTTGACGAACGACCGTATGTAGACCTCTTCCTCTCAAGCCAGTGCAGGTTTTCAATTGTTGGCCAAGAGTTCACCAAAAGCGGGTGGGGATTTGCATTTCCACGTGACTCTCCCTTAGCTGTTGACTTGTCAACTGCCATTCTGACACTGTCAGAGAACGGCGATCTCCAAAGGATCCACGACAAGTGGCTAACGAGAAGCGCTTGTAGTTCACAGAGCACCGAGCTTGAATCGGACCGGCTTCACCTTAGGAGCTTCTGGGGACTCTTTCTCATATGCGGGATAGCATGCTTTTCTGCTCTTGTGATATACTTCATTTTGATGGTACGCCAATTCAGTCGGCATTTCCCCAAAGAATCCGATCCTGCTAGTAGTAATAGTAGTTCAAGGTCTACACGCCTCCAAACGTTCTTATCGTTTGTTGACGACAAAGAAGAGGAAACAAAGAGCAAGTCGAAGAGAAAGTCGTCAATGGACAATGGGAAGGAAGATGAACCAAGGAGTGGATCAAAGAGAAGACAAATGGAGTTTTCCCCTGACAAAAGCGAAGTTAATGGTGGTACTAATCCTAATTCATTAGTTTAG 2790 0.4516 MNLVWLLLLSFLYFGIISNGVSRPDSVNIGAIFTFDSINGRVSKIAMKAAVEDVNSDPSVLGGRKLVLSTHDSNYSGFFGIIGALQYMETDTVAIIGPQNSVMAHVLSHLANELQVPLLSFTATDPTLSALQYPFFVQTSPSDLFQMAAIAEMVSYYGWREVIAVFTDDDHGRNGIAALGDKLAERRCKISYKAALPPDPGATPDEITDILVKVALMESRIIVLHTYSKSGLMVFDVSQKLGMMGSGYVWIATTWLSTVLDSTSPLSPAVADSIQGVLTLRPHTPDSKRKRAFSSRWSQLSDGSIGLNPYALYAYDTVWMLAYAVKAFFDQGNTISFSNDSKLSDVAGGTLHLEAMSIFDGGNQLLHNILQTNMTGLTGPLRFNTDRSIIRPAFDVINVIGTGFRQVGYWSNYSGLSVVPPEMLYAKPPNRSISNQKLYSVIWPGETTIKPRGWVFPNNGRQLRIGVPNRASYREFVSLVKGTDVIKGYCIDVFLAAVNLLPYAVPYRFIPYGNGLMNPSYTELVTSITSNAFDAAVGDIAIVTNRTRIVDFTQPYIESGLVVVVKVRKLNSSAWAFLRPFTPMMWAVTAAFFLVVGAVVWILEHRMNDEFRGPPKKQVVTILWFSFSTLFFAHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLITSTEPIGFQVGSFAENYLNEELNIPKSRLVALESPEKYAMALESGTVAAVVDERPYVDLFLSSQCRFSIVGQEFTKSGWGFAFPRDSPLAVDLSTAILTLSENGDLQRIHDKWLTRSACSSQSTELESDRLHLRSFWGLFLICGIACFSALVIYFILMVRQFSRHFPKESDPASSNSSSRSTRLQTFLSFVDDKEEETKSKSKRKSSMDNGKEDEPRSGSKRRQMEFSPDKSEVNGGTNPNSLV* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02463 929 PIRSF IGluLR_plant 1 924 IPR017103 -
Eupl03g02463 929 SMART GluR_14 464 801 IPR001320 GO:0015276|GO:0016020
Eupl03g02463 929 Gene3D - 574 706 - -
Eupl03g02463 929 Pfam Bacterial extracellular solute-binding proteins, family 3 486 800 IPR001638 -
Eupl03g02463 929 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 27 876 IPR015683 -
Eupl03g02463 929 Pfam Ligand-gated ion channel 801 832 IPR001320 GO:0015276|GO:0016020
Eupl03g02463 929 CDD GluR_Plant 461 799 - -
Eupl03g02463 929 Gene3D - 448 573 - -
Eupl03g02463 929 FunFam Glutamate receptor 574 704 - -
Eupl03g02463 929 SUPERFAMILY Periplasmic binding protein-like II 439 801 - -
Eupl03g02463 929 FunFam Glutamate receptor 142 296 - -
Eupl03g02463 929 Gene3D - 45 391 - -
Eupl03g02463 929 FunFam Glutamate receptor 458 574 - -
Eupl03g02463 929 MobiDBLite consensus disorder prediction 873 929 - -
Eupl03g02463 929 Pfam Receptor family ligand binding region 45 401 IPR001828 -
Eupl03g02463 929 Gene3D - 722 806 - -
Eupl03g02463 929 CDD PBP1_GABAb_receptor_plant 28 420 IPR044440 -
Eupl03g02463 929 SUPERFAMILY Periplasmic binding protein-like I 22 454 IPR028082 -
Eupl03g02463 929 Gene3D - 142 416 - -
Eupl03g02463 929 MobiDBLite consensus disorder prediction 874 914 - -
Eupl03g02463 929 FunFam Glutamate receptor 700 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02463 Eupl-Chr3 56461950 56467384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02463 1 909 Ion Channels AT1G42540 63.272 0.0 1181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02463 K05387 - nnu:104603791 1509.97