Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02461 ATGGAAAGGGACTTCTACCGAGGCCAAGGTAAAAGCACCATGATTATGGTTTGGCTTCTTTTGTTACTGGTTTTCTTTTTGGGGGCATTCTCAAATGGGGTTAGTGGGAATGTCTCTTCAAGACCTGCCGTTGTGAAGGTTGGAGCTATTTTCACTTTTAATTCTACCATTGGGAAAGTTGTGAAGGTTGCATTGGAGGCTGCTGTTGAAGATGTCAATTCCAATTCCGCTGTTCTTGGTGGAACCAAAATGGTCATTAAAATGCAGGATACCAATTATAGTGGATTTCTTGGCATTGTAGATGCTTTACAGTTCATGGGGACTGATGCTGTGGCCATCATTGGTCCACAATCTTCCGTTACGGCCCATGTAATCTCGCACGTCGCAAATGAACTCCAAGTCCCTATATTATCATTTTCGGCCACAGACCCCACCCTCTCTTCACTTCAGTACCCCTTCTTCGTTAGGACAACACAGGATGATCTGTACCAGATGGCTGCAATTGCGGAGATTGTCGACTTCTATGGTTGGAAAGAGGTAATTGCGATCTTCATCGATGACGATTACGGGCGAAATGGAGTAGCTGCATTAGGAGATAAACTTGCCGAGAGACGCTGCAGGATCTCATATAAAGCAGCTATGAACCTTAAAGTGACCCGGGATGACATTATAGATATACTGGTTAAGGTGGCAATGATGCAGTCCCGGGTCCTTGTTCTACACACTTATGACAACAGGGGTCTTGAGATATTGGATGTAGCACACTATCTTGGAATGACGGGAAATGGATATGTGTGGATAGCTACCAATTGGCTCTCTACTGTGTTGGATACTTCTTCACCTCTCCCTTCTGTTTCCATGAATTTGATCCAAGGAGTTCTAACATTGCGCATGCACACACCCGATTCAGAACCAAAACGAACTTTTTTCTCTAGGTGGAGCAAATTGACTAATAAAACATGGGCTGGTGCCGCTTTTGGGTTGAGTACTTATGGTCTATACGCTTACGATTCTGTGTGGCTGCTATCACATGCACTTAATGCATTCTTCGATCAGGGCGGAACTATTTCATTTTCTAATGATTCAAGGTTGCGTGGTACACGGGGTGGGAGTCTACACCTTGAAGCAATGAGCATCTTTAGTGGAGGGAAGCTGTTGCTCAAGAATATTTTGCAAAGCAATCTCAAGGGTCTAACCGGCCCAGTTCAGTTTACTTCAGACAAGTCCCTCATTCATCCTGCATACGAAGTCATTAACGTGATCGGCTCTGGGTTCCGAAGGATTGGGTACTGGTCTAACTATTCTGGGTTATCTGTTGTGCCTCCTGAGATGCTCTACACAAGGCCACCTAACCGTTCAAGTTCAAATCAACAACTACACAGTGTAATTTGGCCCGGGCAAACAACCACGAAGCCTCGCGGGTGGGTTTTCCCCAATAACGGAAAGCAGTTGAGAATTGGAGTCCCTAACCGAATTAGTTATCGTGAATTTGTTTCACAAGTAAGAGGTACTGATATGATGGAGGGGTACTGCATAGATGTATTTACTGCAGCCCTAAATTTGTTACCATATGGTGTCCCATACAAATTAATCCCATATGGAGATGGTCATCAGAACCCGAGTTACAATGAGCTTGTGAATTTGATCACTATGGATGTCTTTGATGGTGCAATAGGTGACATCACAATCGTCACAAACAGAACCAGGATTGTTGATTTTACACAGCCATATATTGAGTCTGGGCTAGTCATAGTTGCCCCTGTTAGGAAGTTGAATTCAAACGCTTGGGCTTTCTTGCAGCCGTTTAGTCCAATGATGTGGTCTGTCACAGGTGTCTTTTTCCTTGCTGTAGGAGCAGTTGTGTGGATTCTGGAGCATAGGATGAACGATGAATTCCGGGGCCCACCTAAAAAACAAGTTGTCACCATCCTATGGTTTAGCTTCTCAACTTTGTTCTTTGCCCACAGAGAGAACACAGTCAGCACACTCGGTCGCTTAGTGCTTATCATATGGCTTTTTGTGGTTCTGATAATCAACTCGAGCTACACTGCAAGCCTGACCTCAATCCTCACAGTGCAACAGCTATCTTCTCCTATCAAAGGGATTGAAAGTTTGATAGTGAGCAATGATCCCATTGGCTTCCAAGTGGGTTCCTTTGCTGAAAACTACCTGCATGAGGAACTCAACATCCCCAAGTCTAGACTCATCCCTCTTGGCTCACCAGAAGCATATACTAAAGCCCTCCAAGATGGTCCCAAGAAGGGGGGTGTTGCTGCTGTGGTCGATGAGCGTGCATATATAGAACTCTTCCTCTCAAGCCAATGCAAATTCACAATTGTAGGCCAACAGTTTACCAAAAATGGGTGGGGATTTGCCTTCCCACGGGACTCTCCCTTGGCCATTGACATGTCAACTGCCATTCTGACACTATCAGAGAATGGCGATCTTCAAAGGATCCAAGACAAGTGGCTGACAAGAAGAGTTTGCAGTTCTTACACCACTGAGCTTGCATCAGACCGGCTTCACCTTAGTAGCTTTTGGGGCCTCTTTCTTGTATGTGGACTGGCTTGCTTTCTCGCTCTCCTCATATACTTCATACTGATGGTACGCCAGTTCAGCAGGCACTACTCTGACGATTCTGATCCTTCTAGTCGAGGTGGCCCTTCTGTGCGTCTCCAGACTTTCCTGTCATTTGTTGACGAGAAGGAAGAGGAAGTAAAGAGCAGGTCAAAGAGAAGACAGTCGGAGAGGTCCTTACATGGTAATGAGAATGAAGACGGATCAGTTAACGAGTCCAAGAGAAGAGACGCAGAAATATCCTCTAACAACGATCTTTATGTTGGCAGTTTGCCTTGTTAA 2859 0.4516 MERDFYRGQGKSTMIMVWLLLLLVFFLGAFSNGVSGNVSSRPAVVKVGAIFTFNSTIGKVVKVALEAAVEDVNSNSAVLGGTKMVIKMQDTNYSGFLGIVDALQFMGTDAVAIIGPQSSVTAHVISHVANELQVPILSFSATDPTLSSLQYPFFVRTTQDDLYQMAAIAEIVDFYGWKEVIAIFIDDDYGRNGVAALGDKLAERRCRISYKAAMNLKVTRDDIIDILVKVAMMQSRVLVLHTYDNRGLEILDVAHYLGMTGNGYVWIATNWLSTVLDTSSPLPSVSMNLIQGVLTLRMHTPDSEPKRTFFSRWSKLTNKTWAGAAFGLSTYGLYAYDSVWLLSHALNAFFDQGGTISFSNDSRLRGTRGGSLHLEAMSIFSGGKLLLKNILQSNLKGLTGPVQFTSDKSLIHPAYEVINVIGSGFRRIGYWSNYSGLSVVPPEMLYTRPPNRSSSNQQLHSVIWPGQTTTKPRGWVFPNNGKQLRIGVPNRISYREFVSQVRGTDMMEGYCIDVFTAALNLLPYGVPYKLIPYGDGHQNPSYNELVNLITMDVFDGAIGDITIVTNRTRIVDFTQPYIESGLVIVAPVRKLNSNAWAFLQPFSPMMWSVTGVFFLAVGAVVWILEHRMNDEFRGPPKKQVVTILWFSFSTLFFAHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLIVSNDPIGFQVGSFAENYLHEELNIPKSRLIPLGSPEAYTKALQDGPKKGGVAAVVDERAYIELFLSSQCKFTIVGQQFTKNGWGFAFPRDSPLAIDMSTAILTLSENGDLQRIQDKWLTRRVCSSYTTELASDRLHLSSFWGLFLVCGLACFLALLIYFILMVRQFSRHYSDDSDPSSRGGPSVRLQTFLSFVDEKEEEVKSRSKRRQSERSLHGNENEDGSVNESKRRDAEISSNNDLYVGSLPC* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02461 952 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 58 74 - -
Eupl03g02461 952 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 335 347 - -
Eupl03g02461 952 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 118 146 - -
Eupl03g02461 952 FunFam Glutamate receptor 160 311 - -
Eupl03g02461 952 SUPERFAMILY Periplasmic binding protein-like II 461 826 - -
Eupl03g02461 952 CDD GluR_Plant 482 824 - -
Eupl03g02461 952 Gene3D - 160 437 - -
Eupl03g02461 952 PIRSF IGluLR_plant 11 947 IPR017103 -
Eupl03g02461 952 Pfam Receptor family ligand binding region 62 422 IPR001828 -
Eupl03g02461 952 MobiDBLite consensus disorder prediction 903 940 - -
Eupl03g02461 952 SUPERFAMILY Periplasmic binding protein-like I 40 476 IPR028082 -
Eupl03g02461 952 Gene3D - 746 793 - -
Eupl03g02461 952 MobiDBLite consensus disorder prediction 903 941 - -
Eupl03g02461 952 FunFam Glutamate receptor 479 595 - -
Eupl03g02461 952 FunFam Glutamate receptor 595 725 - -
Eupl03g02461 952 CDD PBP1_GABAb_receptor_plant 46 441 IPR044440 -
Eupl03g02461 952 Gene3D - 595 720 - -
Eupl03g02461 952 SMART GluR_14 485 826 IPR001320 GO:0015276|GO:0016020
Eupl03g02461 952 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 45 904 IPR015683 -
Eupl03g02461 952 FunFam Glutamate receptor 721 828 - -
Eupl03g02461 952 Pfam Bacterial extracellular solute-binding proteins, family 3 507 825 IPR001638 -
Eupl03g02461 952 Pfam Ligand-gated ion channel 826 857 IPR001320 GO:0015276|GO:0016020
Eupl03g02461 952 Gene3D - 479 594 - -
Eupl03g02461 952 Gene3D - 794 824 - -
Eupl03g02461 952 Gene3D - 63 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02461 Eupl-Chr3 56441350 56447558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02461 25 943 Ion Channels AT1G42540 63.050 0.0 1218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02461 K05387 - ming:122083277 1394.41