Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02450 ATGGATTTATGGACACCTGTCCTGAATCTGATCATTGACACACGTCACACACCTGATTGTACGACGCATAGATTCGTTGCTCTTAAAATCATGAAGAGTGCTTCTGAATTCGCTGAAGCTGCCCTCCATGAGATCCAAGTCTTGTCTGCCTTAGCCAATGGCGACCCCTCAAATTCCAAGTGTGTCATTCAATTGGTCGACCAATTTAAGCATGCAGGCCCAAATGGACAGCATTTGTGTATGGTCCTAGAATTCCTTGGTGACAGCTTGCTTCGGCTGATTAGATATAACCGTTATAGAGGCCTTGCATTGAATAAAGTTAGGGAGATTTGCAGATGGATTTTGCTGGGTCTTGATTACTTGCATAGAGAGCTCGGTATAATCCACACGGACCTAAAACCTGAAAATGTACTTCTTGCCTCCACCATTGATCCCTCCAAAGACCCAGTTCGGTCTGGGTTCTCTCCAATCCTTGAGAGGCCTGAGGGCAATCCGAATGGTGGGGTTGTGGTGAATATTGTTGAGAAGAAGCTGAAGAGGAAGGCAAAGAGGGCGATGGCTAAGATCTCGGAAAGGAGAGCTTCAATGGGGGGTACTTCAAAGCGTGAGAGGTCATTAGAAGGGATTGATCTAAGATGCAAGGTTGTGGATTTTGGAAATGCATGTTGGGCTGATAAACAATTCACAGAAGATATTCAGACAAGGCAGTATAGAGCTCCTGAGGTTATTCTTGGGTCTGGTTACTCCTTCTCTGTTGATATGTGGTCTTTTGCTTGCATTGCCTTCGAGCTTGCTACTGGTGACATGATGTTTGCTCCTAAAAGTGGCCAAGAGTTTAGCGAAGATGAGGATCACCTTGCTCTAATGATGGAACTCTTGGGAAAGATACCTCGAAAGATTGCCATAGGGGGATCTCAATCAAAAGACTTATTTGATAGACATGGAGACCTAAAGAGGATTCGAAGGCTGAAATTCTGGCCTCTTGATCGCCTTCTGGTCGACAAATACAAATTTCACGAATCTGATGCTCATGAGTTCGCTGATTTTCTGTGCCCCCTTCTTGATTTTGCTCCAGAGAAGCGGCAAACAGCAGAACAGTGCTTGCAACATCCGTGGCTCATGATTAGAAATCCAACTCCAAGTGAGGAAAAGAGAGAACCAAGTCTAGAAAAGTTGGAGGTTGGTATGAACAAACTTCAGATTAAGGTGGGTAAGTGA 1218 0.4475 MDLWTPVLNLIIDTRHTPDCTTHRFVALKIMKSASEFAEAALHEIQVLSALANGDPSNSKCVIQLVDQFKHAGPNGQHLCMVLEFLGDSLLRLIRYNRYRGLALNKVREICRWILLGLDYLHRELGIIHTDLKPENVLLASTIDPSKDPVRSGFSPILERPEGNPNGGVVVNIVEKKLKRKAKRAMAKISERRASMGGTSKRERSLEGIDLRCKVVDFGNACWADKQFTEDIQTRQYRAPEVILGSGYSFSVDMWSFACIAFELATGDMMFAPKSGQEFSEDEDHLALMMELLGKIPRKIAIGGSQSKDLFDRHGDLKRIRRLKFWPLDRLLVDKYKFHESDAHEFADFLCPLLDFAPEKRQTAEQCLQHPWLMIRNPTPSEEKREPSLEKLEVGMNKLQIKVGK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02450 405 Gene3D Transferase(Phosphotransferase) domain 1 54 373 - -
Eupl03g02450 405 ProSiteProfiles Protein kinase domain profile. 1 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02450 405 Pfam Protein kinase domain 213 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02450 405 Pfam Protein kinase domain 21 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02450 405 Coils Coil 389 405 - -
Eupl03g02450 405 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 185 380 - -
Eupl03g02450 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Eupl03g02450 405 SMART serkin_6 9 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02450 405 FunFam Serine/threonine-protein kinase SRPK 79 373 - -
Eupl03g02450 405 SUPERFAMILY Protein kinase-like (PK-like) 19 374 IPR011009 -
Eupl03g02450 405 Gene3D Phosphorylase Kinase; domain 1 19 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02450 Eupl-Chr3 56301615 56308127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02450 19 380 EF-hand Containing Proteins AT5G22840 51.691 2.05e-149 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Eupl03g02450 Pkinase 8.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02450 K08832 - cave:132172481 624.78