Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02442 ATGAGAATGAAGCTGGGAAACCTATATTGTGATTCACTAATGACATCTACTGGCCACAAGATCACCGCCAGGCAGCGGTGGACCCCAACACCCGTGCAGCTCCAATTTCTTGAACGTATCTTCGATCAAGGCAACGGGACTCCAAGTAAGCAGAAGATCAAAGAGATAACCAATGAACTAACACAACATGGACAAATTTCGGAAACAAATGTTTATAACTGGTTCCAGAACAGGCGGGCCCGATCCAAACGGAAGCAACTGGTTGTGACACCAAACAATGCAGAATCAGAAGTAGAGACGGATGTCGAATCCCCAAAAGAAAAGAAGGCAAAATCAGAGAACATCCACTCCCATGAAAACCCAGCTCTGACACGGGATGAAACATGCTTCCAAAGTCCTGAAATAAGCTCGGAATTGCATTCCTTAGATCCACAGCCTAATAAAGTGGAGCCCACTTTTCCATTGGACAATGGCTCAAAGTCTTCTCCAAGTTCAGGCCAAGTATCTTTCTATGAGAGTGTACTATCAAACCCAAGAATTGACCACCTTATGGGAAAGATGGGAGTGCCAGGGAGCTTTAATTCTTATCGGCAGGGAGAAGGCTATGACATGATTGGATAA 621 0.4493 MRMKLGNLYCDSLMTSTGHKITARQRWTPTPVQLQFLERIFDQGNGTPSKQKIKEITNELTQHGQISETNVYNWFQNRRARSKRKQLVVTPNNAESEVETDVESPKEKKAKSENIHSHENPALTRDETCFQSPEISSELHSLDPQPNKVEPTFPLDNGSKSSPSSGQVSFYESVLSNPRIDHLMGKMGVPGSFNSYRQGEGYDMIG* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02442 206 Pfam Homeodomain 24 84 IPR001356 GO:0003677
Eupl03g02442 206 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 204 IPR044559 GO:0003700
Eupl03g02442 206 CDD homeodomain 24 86 IPR001356 GO:0003677
Eupl03g02442 206 MobiDBLite consensus disorder prediction 135 168 - -
Eupl03g02442 206 MobiDBLite consensus disorder prediction 82 121 - -
Eupl03g02442 206 ProSiteProfiles 'Homeobox' domain profile. 20 85 IPR001356 GO:0003677
Eupl03g02442 206 MobiDBLite consensus disorder prediction 152 168 - -
Eupl03g02442 206 SUPERFAMILY Homeodomain-like 23 86 IPR009057 -
Eupl03g02442 206 Gene3D - 25 88 - -
Eupl03g02442 206 SMART HOX_1 22 89 IPR001356 GO:0003677
Eupl03g02442 206 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02442 Eupl-Chr3 56222933 56229049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02442 4 206 Wox Gene Family AT4G35550 51.351 7.93e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl03g02442 Homeodomain 4.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02442 - - tss:122657985 326.635