Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02427 ATGGCTTCTTCTCAAACCCCTTTTCTCTCTGCTCTCGCAGTATTCAAGAACATCCTCAACGAAGAACTGATCAGGAGCGTTCATGTCTATCGATTCGAGGATGGGAAAGAAAAGGGGGTGGAGAGAGAGTTTATGTTCTCACCAGGTTCTTATGTGGAGATGGTAAGCCAGCCATTTCTTAAATTATCAAGAGTTCGTGTGTCGGAGCTCTTTGAAGGGCTTGTTATCGGTCTTTGGCTCTGCATACTTGCATTTGATGCCAATCATCCACCAGTTTCGGTCCCCATTCCTTCTATATTAGTAATTTCAAGAAATCCCAAATTGAAATCAATCCCAACATTGGCCGGTGATCTTCAAAAAGTTTTCCAATTGAGGTTCAGAACAGAAAAGAGAGAGCCATCACAGTTTGCACCTGAGGAAATGTGCGAAGAGAGCAAAGATAATTATCACCACTCAACAAGAACTTTGCCTGTTTTTTATCAAGATCTTAACTGTCTTCCTTGTCCTGTTGGTACACCAAGATTACTGGAGGATCACCAAGATGGCGAGGGTGTGCCAGAGGCTGTAGTGAAGAAGAAAAAGAGGGCAGCTACAGAGCACATAGCTCGAATTGCCTTAGACGATCTTGTGAAGTACTTTGATCTTCCGATTGCAGAAGCTTCGAGAAATCTGAAGGTTGGACTCACGGTACTCAAGAGGAAGTGCAGGGAATTCGGTATCCCTCGTTGGCCACATAGGAAGATTAAATCCCTCAACACTCTCATACATAATCTCCAGGAAGAGGCAGAACGTCAGGAGCGAGAAAACAAAGCAGCAGCCATAGCCGTGACAAAGAGGCAAAGGATGCTAGAGAGCGAAAAAGAAGTTATAGAGACGAAACCCTTCATGGAGTTACAGAGTGAGACCAAAAAATTCAGGCAAGATGTTTTCAAGAGAAGACACAGAGCTAGAGCTCTTAACAGCAAATGCTAA 972 0.4383 MASSQTPFLSALAVFKNILNEELIRSVHVYRFEDGKEKGVEREFMFSPGSYVEMVSQPFLKLSRVRVSELFEGLVIGLWLCILAFDANHPPVSVPIPSILVISRNPKLKSIPTLAGDLQKVFQLRFRTEKREPSQFAPEEMCEESKDNYHHSTRTLPVFYQDLNCLPCPVGTPRLLEDHQDGEGVPEAVVKKKKRAATEHIARIALDDLVKYFDLPIAEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLNTLIHNLQEEAERQERENKAAAIAVTKRQRMLESEKEVIETKPFMELQSETKKFRQDVFKRRHRARALNSKC* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02427 323 ProSiteProfiles RWP-RK domain profile. 186 271 IPR003035 -
Eupl03g02427 323 Pfam RWP-RK domain 204 251 IPR003035 -
Eupl03g02427 323 Coils Coil 248 275 - -
Eupl03g02427 323 PANTHER PROTEIN RKD4 134 321 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02427 Eupl-Chr3 56104974 56110683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02427 18 316 AtRKD Transcription Factor Family AT4G35590 47.319 1.96e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Eupl03g02427 RWP-RK 4.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02427 - - nnu:104590221 422.55