Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02424 ATGAGTTGTTTTTCTTGCATTAGTCCTCGCCGAAAGGAAGTAAGTAAGATCGAAGATAGCACCCGCATTCGATCCAGTTCTCGCTACTCCGTTGACTCCTCAGAAAGATGGAGAGGGAAGGCATCTATCGAGAGTAATGAAAATGGCCGGAGGAAGGCCTCACTCAATGGTAAAGGCAAGGATTGCGACAGTGCCAAAAGCTGCGCTGCTCAGAGCTTCACATTTCGTGAACTTGCAACTGCAACAAGAAATTTTAGGGCTACTAATTTGATCGGGGAAGGGGGTTTCGGAAGGGTTTATAAAGGGCGCCTTGAAGCAGGCCAGATTGTTGCAATCAAACAACTTGATCACAATGGCCTTCAGGGGAATCAGGAATTTATTGTGGAGGTTCTCATGTTAAGCCTTCTACACCATACTAATCTTGTCAACTTGATTGGCTACTGCACTGATGGAGACCAAAGGCTCTTGGTTTATGAGTACATGCCAATGGGAAGCTTGGAAAATCATTTGTTTGATGTCAATTCTGACAAAGAGCCGCTGGACTGGAACAAACGAATGAAGATTGCCCTTGGTGCTGCTCAGGGCCTTGAATATCTGCATTGCAAAGCAAATCCACCTGTTATATACCGTGACTTGAAATCTGCGAATATATTGTTGGACAACGAATTCAACCCCAAGCTCTCTGATTTTGGACTTGCTAAATTGGGCCCTGTTGGTGACAAAACTCATGTTTCAACAAGGGTGATGGGGACATACGGCTACTGTGCCCCAGAATATGCCATGAGCGGCAAGCTGACACTCAAATCAGATGTATATAGTTTTGGTGTGGTTATGTTGGAGCTGATCACTGGGCGGAAGGCAATTGATTGTACTAAGGTTCAAGGAGAGCAGAATCTAGTTTCTTGGTCTCGTGCTTTCTTCAAGGACCGGAGGAAATTTGTTCAGTTGGTTGACCCCCTACTGCAAGGCCGCTTCCCTGTCCGCTGTTTGCACCATGCAATCGCAATCACTGCAATGTGTCTCCAAGAGCAGCCAAAGTTTCGACCCCTCATTGGTGATGTTGTTGTAGCACTTGAGTACTTGGCCTCTCAACCGTACGACTCAGAAGCCCGTACGGGTGCAGCACACAGTCCCCCACCTTCACAACAGGACAAGAGTGCTTTTTCACGGGAACCAGACGGTAGAACGTGTTCTGCATCTGTTTAA 1206 0.4677 MSCFSCISPRRKEVSKIEDSTRIRSSSRYSVDSSERWRGKASIESNENGRRKASLNGKGKDCDSAKSCAAQSFTFRELATATRNFRATNLIGEGGFGRVYKGRLEAGQIVAIKQLDHNGLQGNQEFIVEVLMLSLLHHTNLVNLIGYCTDGDQRLLVYEYMPMGSLENHLFDVNSDKEPLDWNKRMKIALGAAQGLEYLHCKANPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMSGKLTLKSDVYSFGVVMLELITGRKAIDCTKVQGEQNLVSWSRAFFKDRRKFVQLVDPLLQGRFPVRCLHHAIAITAMCLQEQPKFRPLIGDVVVALEYLASQPYDSEARTGAAHSPPPSQQDKSAFSREPDGRTCSASV* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02424 401 MobiDBLite consensus disorder prediction 369 401 - -
Eupl03g02424 401 ProSitePatterns Protein kinases ATP-binding region signature. 91 113 IPR017441 GO:0005524
Eupl03g02424 401 SMART serkin_6 85 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02424 401 PANTHER OS07G0668900 PROTEIN 3 370 - -
Eupl03g02424 401 Gene3D Phosphorylase Kinase; domain 1 57 160 - -
Eupl03g02424 401 FunFam Serine/threonine-protein kinase CDL1-like 57 160 - -
Eupl03g02424 401 MobiDBLite consensus disorder prediction 375 401 - -
Eupl03g02424 401 Gene3D Transferase(Phosphotransferase) domain 1 161 375 - -
Eupl03g02424 401 CDD STKc_IRAK 91 359 - -
Eupl03g02424 401 FunFam Serine/threonine-protein kinase PBS1 161 376 - -
Eupl03g02424 401 ProSiteProfiles Protein kinase domain profile. 85 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02424 401 Pfam Protein kinase domain 87 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02424 401 SUPERFAMILY Protein kinase-like (PK-like) 68 359 IPR011009 -
Eupl03g02424 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02424 Eupl-Chr3 56041455 56047736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02424 1 383 Glycoside Hydrolase AT3G07070 60.207 1.28e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl03g02424 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02424 - - nnu:104590211 618.616