Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02408 ATGGGTAGATCGGACGAGAACAATCCAGGTGTGATTGGACCCACAAATTTCCAAGGTCTTCGAACGGGAGGTGGGAAGATCGTACCGGAAATCAGACACAACCGAAGAGCTTTGAGCAATATTAATCGGAATTTAGTAGGAGTGCCACCTTACCCTTGTGCAGTCAACAAGAAAGGATTATCAGAAAAACATGCAATCTGTGATAAGAATCTGCCCATTCCGGCGCATCGACCAATTACAAGGAAATTTGCCGCACAAATGGCAAACAAGCAGCAGCAGCCTTGCAGCAAGGAAACTGAGAAGCCAAGTGAATCAGAAGACTGTACGATCATAGATGTGGAAGAGTACAAGGCAGCAGCTAGTGACTTCCCTGTTCCAATGCACGCGAAGCACACAGAAGCGATGTTGGACGAAATCGATCAGATGGAAGAGGTTGAAATGGAGGATATAGTTGCAGAGCCCGTTGTGGATATCGACAGCTGTGACTTGAATAACCCACTTGCTGCTGTTGAGTATGTCGAAGATATCTACGCCTACCACAGAAAAACTGAGAGTTATAGCTGTGTCTCGCCGAACTATATGGCTCAGCAATTCGACGTCAACGAGAAGATGAGGGCTATCCTCATTGACTGGCTCATTGAGGTACACTACAAGTTTGAGCTCCTGGATGAAACGTTATTTCTTACAGTCAATCTTCTAGACAGATTTTTATCGCGCCAAACAGTATTGAGAAAGAAGCTTCAGTTGGTTGGAGTGACAGCCATGCTCTTAGCGTGCAAGTACGAGGAAGTTTCTGTCCCTGTCGTGGAGGATCTAATTCTGATATCAGACAAGGCTTACACAAGGAAGGAAGTTCTCGACATGGAGAAGTTGATGGTCAACACATTACAGTTCAACATGTCGGTTCCGACACCATACGTGTTCATGAGGAGGTTTATCAAGGCATCTCAATCCGACAAGAAGCTCGAGCTTCTATCGTTCTTCCTGATTGAGCTTTGCCTGGTCGAATATGAAATGCTCAAATTCCCACCATCTCTGCTAGCTGCAGCTGCAATCTACACTGCTCAGTGTACTCTTAATAGGAGTAAGCAGTGGAGTAAGACCAGTGAGTGGCACTCTAGCTACTCGGAAGATCAGCTGCTGGAATGCTCGAGGTTGATGGTTACTTTCCATCAGAATGCAGGAACAGGGAAACTCACCGGGGTAAACAGGAAGTACAGTACATTTAAGTTTGGTTGTGCAGCAAAATCTGAACCGGCACACTTTCTCTTAGAGACCAGCCTCTAG 1287 0.4592 MGRSDENNPGVIGPTNFQGLRTGGGKIVPEIRHNRRALSNINRNLVGVPPYPCAVNKKGLSEKHAICDKNLPIPAHRPITRKFAAQMANKQQQPCSKETEKPSESEDCTIIDVEEYKAAASDFPVPMHAKHTEAMLDEIDQMEEVEMEDIVAEPVVDIDSCDLNNPLAAVEYVEDIYAYHRKTESYSCVSPNYMAQQFDVNEKMRAILIDWLIEVHYKFELLDETLFLTVNLLDRFLSRQTVLRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYTRKEVLDMEKLMVNTLQFNMSVPTPYVFMRRFIKASQSDKKLELLSFFLIELCLVEYEMLKFPPSLLAAAAIYTAQCTLNRSKQWSKTSEWHSSYSEDQLLECSRLMVTFHQNAGTGKLTGVNRKYSTFKFGCAAKSEPAHFLLETSL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02408 428 Pfam Cyclin, C-terminal domain 303 418 IPR004367 -
Eupl03g02408 428 SMART cyclin_7 210 294 IPR013763 -
Eupl03g02408 428 SMART cyclin_7 307 389 IPR013763 -
Eupl03g02408 428 ProSitePatterns Cyclins signature. 205 236 IPR006671 -
Eupl03g02408 428 Pfam Cyclin, N-terminal domain 175 301 IPR006671 -
Eupl03g02408 428 CDD CYCLIN_AtCycB-like_rpt1 152 298 - -
Eupl03g02408 428 SMART Cyclin_C_2 303 420 IPR004367 -
Eupl03g02408 428 CDD CYCLIN_AtCycB-like_rpt2 303 419 - -
Eupl03g02408 428 Gene3D - 175 415 - -
Eupl03g02408 428 SUPERFAMILY Cyclin-like 302 420 IPR036915 -
Eupl03g02408 428 PANTHER CYCLINS 117 407 IPR039361 -
Eupl03g02408 428 MobiDBLite consensus disorder prediction 1 24 - -
Eupl03g02408 428 Gene3D - 189 301 - -
Eupl03g02408 428 SUPERFAMILY Cyclin-like 164 300 IPR036915 -
Eupl03g02408 428 FunFam G2/mitotic-specific cyclin-1 287 415 - -
Eupl03g02408 428 PIRSF Cyclin_A_B_D_E 26 428 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02408 Eupl-Chr3 55665306 55667988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02408 1 424 Core Cell Cycle Gene Families AT1G20610 62.014 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02408 K21777 - nnu:104587119 699.508