LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl03g02389	ATGTGGTCTGTCGCTTTCTGTGTCATAGTCTCGCTTATCGTAAGCATCATGCATTGGGTATATAGATGGAGGAATCCGAGATGCAATGGTATACTCCCTCCAGGTTCTATGGGCTTACCACTAATTGGAGAAACCATTGAGTTCTTCATGTCCAGCAATTCCATAGATGTTCCGGTTTTCATCAAGAAGAGAGTAGCCAGATACGGACCATTGTTCCGAACTAGCGTGGCAGCTCGTCCGCTCATAATATCAACCGACACTGAATTCAACCATTTCATCTTGCAACAAGAAGGGAAGTTGGTCGAGTCCTGGTACATGGACTCCTATGCAAAGATCTTTGGGCAACAATCGGGTGATTTGGTTACTGCACGAAGTAGCACTCACAAGTACCGTAGAAACATGTTTATGAATCACTTTGGTCTTGAAAGCCTAAAAGAAAGGATACTCCCTCGAGTGGAAGAGATGGCACATGGAAGCCTAGAATCTTGGTCTAGCCAAGCATCCGTGGAAGTCAAGGAAGCCACTTCAAATGTGATATCTAATTTGACTTTTAAGCTGCTTTTCGGTGATGATTCAACCAAGTATTCGGAGAATTTGAGTAAGAACATAAATACAATCACACGATGTCTGATGTCCTTCCCCTTGAACATCCCTGGAACTGCTTTCCACAAATCTTTAAAGGTCCAGAAGAAGATATTAAAGATGATTAAGGATATGATAGAGGAGAGACGTGCATCACCTGAGAGGCGTCATGGGGGTTTGCTGGACCATGTCATCCAAGACATGAAAGATGAGACATTCTTAACGGAGGAGTTCGTTGTTTACATGCTGTTTTCGTTTCTGCTTGTCAGCTTCAAGGCGACTTCAGCAACTCTAACTTCTGCCATTAAGTTACTTACAGATCATCCTTCAGTACTGAAGGAACTGACGGATGAACACGAGGCAATTCTTAAAAGAAGGGTAAATGTGAATTCGACAACCACATGGGAAGAATATAAATCGATGACTTTTACGTCTCACGTTATCAACGAAACACTTCGGCTGGCGAACGTTGCGCCGATGATTTTAAGAAGAGCAATAACAGATATCGAAATAATGGGATATACAATTCCAGCAGGCTGGACAATTATGATTCCTCCTTCAGCTACTCATTTGAATCCTGAAAAGTTCGAAGATCCCCTTGCATTCAATCCATGGCGATGGAAGGAGCTGGGATCAAATATTACATCCAAGGATTTCAAGGCTTTTGGTAGTGGACCGAGGAAATGCGCAGGAGCAGAGTTCACCAAGGAGGTGATGACCATCTTTCTACATGTCTTGGTCACCAAGTACAGATACGGACCATTGTTCCGAACTAGCGTGGCAGCTCGTCCGTTGGTAATATCAACCGACGCGGAATTCAACCATTTCATCTTGCAACAAGAAGGTAAGTTGGTGGAGTCCTGGTACTTGGACTCCTATGCAAAGATCTTTGGGGAACAATCGGGTGATTTGGTTACCGCATCAAGTGAAGCTCACAAGTACCGCAGAAACATGTTTATGAATCACTTTGGTCTTGAAAGTCTAAAAGAAAGGATACTCCCTCAAGTGGAAGAGATGGCAGGTGGAAGCCTAGAATCTTGGTCGAGCCAAGCATCCGTGGAAGTGAGGGACGCCACTTCAAATATGATATCTAATTTGACTTTTAAGCTGCTGTTCGGTGATGTTTCAAGCAAGTCTTGCGAGAATTTGAGTCAGACCATAAACATAATCACACGATGTCTTTTGTCCTTCCCCTTGAACATCCCTGGAACTACTTTCTATAAATCTTTGAAGGCCCAGAAGAAGATGTTAAAGATGATAAAGGATATGTTAAGGGAGAGACGAGCATCGCCTGAGAGGAGTCATGGGGGTTTGCTTGACCATGCCATCCGAGACATGAAAGATGAGAAATTCTTAACAGAGGACTTCATTGTTTACATGCTGTTCTCCTTTCTGTTTGTCAGCTTCAAGTCGACTTCAGCAACTCTAACTTCAGCCATGAAGTTACTGACAGATCACCCTTCAGTACTCAAGGAACTGACGGATGAACACGAGGCAATTCTTAAAAGAAGGGTAAATGTGAATTCGACAACCACATGGGAAGAATATAAATCGATGACTTTTACATCTCACGTGAGTTTCTCATTACATTTTTCTTTTACATCACAATGTTCCTGTTGTTTCTATATAAGTAGAGCATGGTCTTTGAAATTTTTCTTTGGATTACAGGTTATCAACGAAACACTTCGGCTGGCGAACGTTGCGCCCATGCTTTTAAGAAGAGCAATAACAGATATCGAAATAAAGGGGTATACAATTCCAGCAGGCTGGACAATATTGATTCCTCCTTCAGCTACTCATTTGAATCCTGAAAAGTTTGAAGATCCCCTTGCCTTCAATCCATGGCGATGGAAGGACTTGGGATCAAATACTACAACGAAGGATTTCAAGGCTTTTGGTAGTGGACCGAGGAGATGCGCAGGAGCAGAGTTCACCAGGGAGGTGATGATCATCTTTCTACATGTCTTGGTCTCCAAGTACAGGTGGACGAAAATCAAAGGAGGGGATATAGTTCGAACTCCAGCTTTAGAATATCCAAATGGTTTTCACATTAAAGTCTTTAGAAAAGACTAA	2655	0.4267	MWSVAFCVIVSLIVSIMHWVYRWRNPRCNGILPPGSMGLPLIGETIEFFMSSNSIDVPVFIKKRVARYGPLFRTSVAARPLIISTDTEFNHFILQQEGKLVESWYMDSYAKIFGQQSGDLVTARSSTHKYRRNMFMNHFGLESLKERILPRVEEMAHGSLESWSSQASVEVKEATSNVISNLTFKLLFGDDSTKYSENLSKNINTITRCLMSFPLNIPGTAFHKSLKVQKKILKMIKDMIEERRASPERRHGGLLDHVIQDMKDETFLTEEFVVYMLFSFLLVSFKATSATLTSAIKLLTDHPSVLKELTDEHEAILKRRVNVNSTTTWEEYKSMTFTSHVINETLRLANVAPMILRRAITDIEIMGYTIPAGWTIMIPPSATHLNPEKFEDPLAFNPWRWKELGSNITSKDFKAFGSGPRKCAGAEFTKEVMTIFLHVLVTKYRYGPLFRTSVAARPLVISTDAEFNHFILQQEGKLVESWYLDSYAKIFGEQSGDLVTASSEAHKYRRNMFMNHFGLESLKERILPQVEEMAGGSLESWSSQASVEVRDATSNMISNLTFKLLFGDVSSKSCENLSQTINIITRCLLSFPLNIPGTTFYKSLKAQKKMLKMIKDMLRERRASPERSHGGLLDHAIRDMKDEKFLTEDFIVYMLFSFLFVSFKSTSATLTSAMKLLTDHPSVLKELTDEHEAILKRRVNVNSTTTWEEYKSMTFTSHVSFSLHFSFTSQCSCCFYISRAWSLKFFFGLQVINETLRLANVAPMLLRRAITDIEIKGYTIPAGWTILIPPSATHLNPEKFEDPLAFNPWRWKDLGSNTTTKDFKAFGSGPRRCAGAEFTREVMIIFLHVLVSKYRWTKIKGGDIVRTPALEYPNGFHIKVFRKD*	885

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl03g02389	884	PANTHER	CYTOCHROME P450 26	32	444	-	-
	Eupl03g02389	884	Gene3D	Cytochrome P450	445	882	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g02389	884	Gene3D	Cytochrome P450	26	444	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g02389	884	SUPERFAMILY	Cytochrome P450	19	445	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g02389	884	FunFam	Cytochrome P450 family protein	24	446	-	-
	Eupl03g02389	884	Pfam	Cytochrome P450	445	718	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g02389	884	Pfam	Cytochrome P450	33	444	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g02389	884	Pfam	Cytochrome P450	750	866	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Eupl03g02389	884	Coils	Coil	601	621	-	-
	Eupl03g02389	884	SUPERFAMILY	Cytochrome P450	445	865	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Showing 1 to 10 of 21 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl03g02389	Eupl-Chr3	55385381	55403564	Dispersed/Proximal

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl03g02389	445	883	Cytochrome P450	AT1G12740	43.049	2.46e-126	387

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl03g02389	-		-	qsu:112027775	530.406

Showing 1 to 1 of 1 entries