Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02371 ATGGGTTGCTGTGAATCTTGCTTATTAACCGAAACTCACCCAGAAAAAGGACGACAGCAGCAGCAACATCACCACCACCACACCCCTCCCTACAACCACCCTCCCCCTTCTGCCGACTCCGACCGGGCAGGCGGCGCCACCGGTGGTGGAGTCCCACCCTTCTCTGAGTTTTCTTTCTCCGACCTCAAAGCGGCCACGAATAACTTCAGCTCCGACTTCATCGTCTCCGAGAGCGGCGAAAAAGCCCCTAATTTCGTCTACAAGGGCCGTCTCCAGAATCGCCGATGGATCGCCGTCAAGAAATTCCCCAAAATGGCCTGGCCCGATCCCAAGCAGTTCGCTGAGGAGGCATGGGGTGTCGGGAAGTTGCGGCATCGGAGGCTTTCGAATTTGATCGGGTACTGCTGTGACGGTGATGAGCGGCTGCTCGTTGCGGAGTTCATGCCCAACAATACCCTCGCTAAGCATCTATTCCACTGGGAAAATCAAACTATTGAGTGGGCCATGCGTCTAAGAGTTGCTTTGTATATTGCCGAAGCCTTGGATTATTGTAGTACTGAAGGCCGACCGTTGTACCATGACCTGAATGCTTATAGGGTTCTTTTTGATGAGGATGGTGATCCACGGCTTTCCTGTTTTGGCCTTATGAAAAATAGCAGGGATGGGAAAAGTTATAGTACAAATCTTGCTTACACGCCTCCTGAGTATCTAAGAAATGGGAGGGTCACTCCTGAAAGTGTTATCTTCAGTGTTGGCACCGTGCTTTTGGATCTTCTTAGCGGAAAGCACATCCCTCCAACTCATGCTCTTGATATGATACGTGGCAAAAACATCCTTCTCTTAATGGATTCACATTTAGAGGGAAACTTTTCAATAGAAGAGGCAACTGTGGTTGTTGGACTTGCCTCTCAGTGTTTGCAATATGAACCTAGGGAGAGGCCCAATCTGAAAAAGCTTGTTGCAACACTTACACCATTGCAAACCGAACCTCATGTTCCATCTTATGAGATGCTGGGCATTCCAAAGCACGAGGAAGCCCCTCCTACCCCCCAGCACCCACTGTCACCAATGGGCGAGGCCTGTCAACGAATGGATCTCACTGCTATCCATCAGATTTTGGTGATGACACATTACAGAGACGATGAAGGAACCAATGAGTTATCCTTCCAAGAGTGGACACAACAAATGAGGGATATGCTGGAGGCAAGGAAGCGTGGGGACTTTGCTTTTCGTGATAGAGACTTTAAAACTGCCATCGACTGTTATTCTCAGTTCACAGATGTAGGGACGATGGTTTCACCAACTGTTTATGCAAGGCGGAGTCTCTGCCACCTCCTTTGTGACCAGCCAGATGCTGCCCTCCGAGATGCAATGCAAGCACAATGTGTCTATCCAGAATGGCCCACGGCCTTCTACATGCAGGCTGTTGCCCTTGCCAAGCTAGACATGCATAAGGATGCGGCTGACATGTTGAACGAAGCTGCCGGACTAGAAGAAAAGAGGCAACGAGGTGGGCGAGGATCCTGA 1527 0.501 MGCCESCLLTETHPEKGRQQQQHHHHHTPPYNHPPPSADSDRAGGATGGGVPPFSEFSFSDLKAATNNFSSDFIVSESGEKAPNFVYKGRLQNRRWIAVKKFPKMAWPDPKQFAEEAWGVGKLRHRRLSNLIGYCCDGDERLLVAEFMPNNTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSVGTVLLDLLSGKHIPPTHALDMIRGKNILLLMDSHLEGNFSIEEATVVVGLASQCLQYEPRERPNLKKLVATLTPLQTEPHVPSYEMLGIPKHEEAPPTPQHPLSPMGEACQRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDFAFRDRDFKTAIDCYSQFTDVGTMVSPTVYARRSLCHLLCDQPDAALRDAMQAQCVYPEWPTAFYMQAVALAKLDMHKDAADMLNEAAGLEEKRQRGGRGS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02371 508 Pfam Protein kinase domain 86 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02371 508 SUPERFAMILY TPR-like 402 498 IPR011990 GO:0005515
Eupl03g02371 508 ProSiteProfiles Protein kinase domain profile. 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02371 508 FunFam probable serine/threonine-protein kinase At4g35230 45 147 - -
Eupl03g02371 508 FunFam probable serine/threonine-protein kinase At4g35230 397 506 - -
Eupl03g02371 508 Gene3D Tetratricopeptide repeat domain 397 504 IPR011990 GO:0005515
Eupl03g02371 508 Gene3D Transferase(Phosphotransferase) domain 1 149 339 - -
Eupl03g02371 508 SUPERFAMILY Protein kinase-like (PK-like) 53 333 IPR011009 -
Eupl03g02371 508 Gene3D Phosphorylase Kinase; domain 1 50 147 - -
Eupl03g02371 508 MobiDBLite consensus disorder prediction 14 50 - -
Eupl03g02371 508 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 36 503 IPR045845 GO:0004672|GO:0009742
Eupl03g02371 508 FunFam probable serine/threonine-protein kinase At5g41260 149 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02371 Eupl-Chr3 55019101 55036154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02371 57 355 Glycoside Hydrolase AT3G07070 33.945 1.37e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Eupl03g02371 Pkinase 6.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02371 K14500 - nnu:104603720 933.324