Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02361 ATGGCTGTCTTTCTATTCTTCCTCTTCTTTCTCATCTCCTCTGTGACTGCCTGTGATCGCTGTGTGCATCAATCCAAGGCTGCTTATTTCTCCTCATCTGCTGCTCTCTCATCTGGGGCTTGTGGGTATGGTTCCTTAGCTATGGGCTTCAATGGTGGACACCTTGCAGCTGGTGTTCCTTCTCTTTATAGAGATGGTGTTGGCTGTGGAGGCTGCTTTCAGATAAGGTGCAAGAACGAGACCCTTTGTAGCAGAGGAGGGACTAAAGTTATCTTAACGGATCTCAATCGAAGTAACAAAACAGATTTTGTTCTTAGTAACAGAGCTTTTGTGTCAATGGCTCGCAATGGTTTGGCCCAAGACATTTTAAAGCTTGGGATTGTCGACGTGGAATATAAGAGGGTACCTTGTGAGTATAAAAAACAGAATTTGTCTATACGAGTGGAAGAGAAGAGCCAAAAACCACATTATTTAGCAATTAAGTTCCTATATCAAGGTGGACAGACAGACATTGTCGGCGTAGATGTAGCTCAGGTTGGTTCTTCAAATTGGGGATACATGAGCCGGAATTATGGAGCTGTCTGGGACACGAGTCGAGTTCCAATTGGGCCATTGCAGTTTCGGCTAGTGGTAACAGGAGGGTATGATGGAAAGTGGGTTTGGGCACAGAAAGTTCTCCCAGTTGACTGGAAGGCTGGGGCAATCTACGAATCAAGTGTTCAGATCAGTGACATTGCTCAAGAGGGTTGCTCTCCTTGTGACAATGAGAACTGGAAAAGAGTAGTGACATTGAAAAGAGAAATTCCTAGGATTGGGAGAGAAGTACAGGGAAGAAAGAAGAAGACGGTGGGACAAGAGAGGAAAGAAGAAGTGGTCATTTTAGAAGATGTTAAATCAAAGTCGTTGAGAATTGAGATCGAGAGGGAGATGGGAGGACATGGACATGGAGATGGACACAGCACGACGTACAAAGGCTTCACCATGCATCACCCGAAGCGATGGCATGCCCTCACCGGAAAGGGCATGTGCGCCATCATGTGGTTTTGGGTGCTTTACAGAGCTAAGCACGATGGCCCTGTAGTCTTGGGTTGGCGACATCCTTGGGAGGGCCATGAGGATCACTCTCATGGACATGGGCATGAGCATGAGGATGTTGATTAG 1161 0.4651 MAVFLFFLFFLISSVTACDRCVHQSKAAYFSSSAALSSGACGYGSLAMGFNGGHLAAGVPSLYRDGVGCGGCFQIRCKNETLCSRGGTKVILTDLNRSNKTDFVLSNRAFVSMARNGLAQDILKLGIVDVEYKRVPCEYKKQNLSIRVEEKSQKPHYLAIKFLYQGGQTDIVGVDVAQVGSSNWGYMSRNYGAVWDTSRVPIGPLQFRLVVTGGYDGKWVWAQKVLPVDWKAGAIYESSVQISDIAQEGCSPCDNENWKRVVTLKREIPRIGREVQGRKKKTVGQERKEEVVILEDVKSKSLRIEIEREMGGHGHGDGHSTTYKGFTMHHPKRWHALTGKGMCAIMWFWVLYRAKHDGPVVLGWRHPWEGHEDHSHGHGHEHEDVD* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02361 386 Pfam Expansin C-terminal domain 146 227 IPR007117 -
Eupl03g02361 386 PRINTS Major pollen allergen Lol pI signature 114 129 IPR005795 GO:0005576|GO:0019953
Eupl03g02361 386 PRINTS Major pollen allergen Lol pI signature 147 162 IPR005795 GO:0005576|GO:0019953
Eupl03g02361 386 PRINTS Major pollen allergen Lol pI signature 214 231 IPR005795 GO:0005576|GO:0019953
Eupl03g02361 386 PRINTS Major pollen allergen Lol pI signature 57 68 IPR005795 GO:0005576|GO:0019953
Eupl03g02361 386 PRINTS Major pollen allergen Lol pI signature 163 178 IPR005795 GO:0005576|GO:0019953
Eupl03g02361 386 CDD DPBB_EXLA_N 13 139 - -
Eupl03g02361 386 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
Eupl03g02361 386 Pfam Lytic transglycolase 56 132 IPR009009 -
Eupl03g02361 386 SUPERFAMILY PHL pollen allergen 143 238 IPR036749 -
Eupl03g02361 386 PANTHER EXPANSIN-B3 11 241 - -
Eupl03g02361 386 Gene3D - 12 138 IPR036908 -
Eupl03g02361 386 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Eupl03g02361 386 PRINTS Expansin/Lol pI family signature 184 198 IPR007118 GO:0005576
Eupl03g02361 386 PRINTS Expansin/Lol pI family signature 224 238 IPR007118 GO:0005576
Eupl03g02361 386 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Eupl03g02361 386 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Eupl03g02361 386 Gene3D - 139 242 IPR036749 -
Eupl03g02361 386 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 238 IPR007117 -
Eupl03g02361 386 SUPERFAMILY Barwin-like endoglucanases 7 140 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02361 Eupl-Chr3 54856284 54893509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02361 36 259 Expansin Gene Family AT3G45970 62.115 2.79e-108 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02361 - - ming:122074635 425.246