Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02358 ATGGGGCACGATAGGATATGGATCGACCCCAAAAGCGGCTTCTGCGAGTCGAACTCCATCTTCTACAGCAAGAGAAAACCATTACTTCTCCCCTCCAATGAATATCTCGACATCACCACCTTCATTTCTTCCCATGTCCACCACGGAAAGATCGCCTTCATCGACGCCTCCACTGGCAGCCACCTCACCTACAAACAGCTATGGCGAGCAGTTGATTCAGTCACCACATGTCTCTCCGAAATGGGTATCTGCAAAGGTCAAGTCGTCCTCGTCCTCTCGCCAAACTCCATATTTTTCCCCATAATCTGTCTCTCTGTCTTGACTCTTGGGGCTATTGTTACCACAACCAACCCGCTCAACACACCCCATGAAATCGGTACGCAAATCGCCGATTCCAAACCGATTCTAGCCTTTACCACTCAGTTTCTCCTATCAAAACTCGCTGGTACAGATCTCCCTATCGTTCTCATAGGAGAACGTGATAACTCGGCCAGTAACGCAAGAATTGTTTCATCGCTGGAAGACATGATGAAGAAGGAGCCGAGTCAAAGCCGAATCAAAGAGCGAGTCAGCCAAGACGACATAGCGACTCTGTTGTACTCTTCTGGGACGACCGGCCGGAGTAAGGGTGTTATTTCGTCACATCGGAATCTCATAGTGATGGTTCAAAATGGAGTAAATATCATGAGTCGGATACAATCAGAAAACGGAGCGCAGACTGTCCTATCTACAGTCCCCATGTTCCACGTGTATGGCTTTGGGGTGTTCGTGACAGGGATGCTGGCGTCGGGATCGACGGTGGTGGTGCTCTCGAGATTTGAGATGGACGTGATGCTCTCTGCTATTTCCAAATATAGCATAACATACTTGCCTCTCGTGCCGCCGGTGCTTGTTTCACTAATTAATAACGCTGATAAAATTCGGGCGAGATATAATTTGGGGTCGTTGCAGTTGGTTTTATCAGGTGGGGCCCCATTGAGTAAGGAAGTGATCAAGGGTTTCTTGACGGTGTATCCTAAGATCAAGATTCTTCAAGGGTATGCATTGACGGAGACAACAGGGTTAGGTTCGTCAACCGACACGCTAGAGGAAAGCATGCGGTACGGCACGGCCGGAATACTATCGGCTTCCCTTGATGCGAAAATCGTTGATACGGGGACTGGAAATGCCTTGCCGGTTAATCGGACTGGCGAACTTTGGCTACGCGGCCCTTCCATCATGAAAGGTTATTTAAACAACCCTGAAGCGACTGCAGCGACTTTAGATTCTGATGGGTGGTTAAGAACTGGTGATCTTTGCTATATTGATGATGATGGTTACATCTTCGTCGTTGATAGATTGAAGGAGCTGATCAAATACAAAGGCTATCAGGTCCCTCCCGCGGAACTAGAGGCACTGTTGGTTACTCATCCAGAAATTGCAGACGCCGCGGTCATACCATTCCCGGATAAGGAGGTCGGACAGTTTCCAATGGCATATGTGGTAAGAAGAGCAGGAAGTAATTTGACGGAGAACGAAATCATGGACATAGTAGCAACACAGGTGGCTCCATACAAAAGAATCCGACGAGTTGCATTTGTGGCTGCCATCCCCAAAACCCCATCCGGCAAGATTCTTAGGAAGTATCTCATTAAGCTTGCGACCTCCAAGCTCTGA 1656 0.4837 MGHDRIWIDPKSGFCESNSIFYSKRKPLLLPSNEYLDITTFISSHVHHGKIAFIDASTGSHLTYKQLWRAVDSVTTCLSEMGICKGQVVLVLSPNSIFFPIICLSVLTLGAIVTTTNPLNTPHEIGTQIADSKPILAFTTQFLLSKLAGTDLPIVLIGERDNSASNARIVSSLEDMMKKEPSQSRIKERVSQDDIATLLYSSGTTGRSKGVISSHRNLIVMVQNGVNIMSRIQSENGAQTVLSTVPMFHVYGFGVFVTGMLASGSTVVVLSRFEMDVMLSAISKYSITYLPLVPPVLVSLINNADKIRARYNLGSLQLVLSGGAPLSKEVIKGFLTVYPKIKILQGYALTETTGLGSSTDTLEESMRYGTAGILSASLDAKIVDTGTGNALPVNRTGELWLRGPSIMKGYLNNPEATAATLDSDGWLRTGDLCYIDDDGYIFVVDRLKELIKYKGYQVPPAELEALLVTHPEIADAAVIPFPDKEVGQFPMAYVVRRAGSNLTENEIMDIVATQVAPYKRIRRVAFVAAIPKTPSGKILRKYLIKLATSKL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02358 551 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Eupl03g02358 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 22 448 - -
Eupl03g02358 551 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Eupl03g02358 551 Pfam AMP-binding enzyme 46 453 IPR000873 -
Eupl03g02358 551 CDD 4CL 30 543 - -
Eupl03g02358 551 Gene3D - 449 550 IPR045851 -
Eupl03g02358 551 Gene3D - 19 448 IPR042099 -
Eupl03g02358 551 SUPERFAMILY Acetyl-CoA synthetase-like 45 549 - -
Eupl03g02358 551 FunFam 4-coumarate--CoA ligase 2 449 550 - -
Eupl03g02358 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02358 Eupl-Chr3 54820786 54825457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02358 8 551 Monolignol Biosynthesis Gene Families AT1G20500 60.291 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02358 K10526 - ming:122083862 818.92