Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02357 ATGTGGAAGCTGGCGATAGCGAGGATAAAGCTGCTGAGGAACAAGAGAGAGGTAGTGGTGAAGCAGATGAGGCAAGACGTCGCCTCGCTTCTTCAGTCAGGCCAGGACGCTACCGCCAGCATCAGGGTTGAACATGTGATAAGGGAACAAAATATTATGGCAGCAAATGAGATCATTCAACTCTTCTGCGAACTAGTTGTGGTGCGACTGCCAATCATTGCAAAGCAAAGGGAATGCCCTGCAGATTTGAAAGAAGAGATCTCTAGTTTAATATATGCAGCTCCAAGGTGCCCAGATATCCCTGAACTATTGCAAATCTGGAATATTTTCGAAAAGAAATATGGAAAAGAATTTGTATCTGCAGCAGTGGATCTACATCCGGATTGTGCTGTGAATTGCACGCTGATCGAGAAACTATCTGTTAGACCACCTACTGGTGAAGTTAAGTTGAAGCTCATGAAGGAAATAGCTAAGGAGTATCAGATTGAATGGGATACAACAGACTGCAAGAAGGAGCTTCTGCAGCCTCCTGAAGAGCTCATAGAAGGACCGCGTACATTTGTTAGTGCCATCAGCATGCCCGTGAGGCCTATATCATCACAGGGTTATTTCAAAAACCCTGAAGCAACCGCATCAACTTTAGATTCCGATGGATGGTTAAGAACTGGTGATCTCTGCTACATTGATAATGATGGTTACATCTTCGTTGTTGATCGGTTGAAGGAGCTGATCAAATACAAGGGCTATCAGGTTCCTCCATCAGAACTAGAGGCACTGTTGCTTACTCATCCGGAAATTGCTGATGCTGCCGTCATACCATTTCCGGATAAGGAGGTTGGACAGTTTCCCATGGCATATGTGGTGAGAAAAGCAGGAAGTGATTTGTCAGAGAGTGCAGTCATGGAGTTGATAGCAAAGCAGGTGGCTCCATACAAGCGAATCCGACGAGTCACATTTGTAGCTGCAATCCCCAAGAACCCATCCGGCAAGATTCTTAGGAAGGATCTCGTTAAGCTTGCAACCTCCAAGCTTTGA 1035 0.4551 MWKLAIARIKLLRNKREVVVKQMRQDVASLLQSGQDATASIRVEHVIREQNIMAANEIIQLFCELVVVRLPIIAKQRECPADLKEEISSLIYAAPRCPDIPELLQIWNIFEKKYGKEFVSAAVDLHPDCAVNCTLIEKLSVRPPTGEVKLKLMKEIAKEYQIEWDTTDCKKELLQPPEELIEGPRTFVSAISMPVRPISSQGYFKNPEATASTLDSDGWLRTGDLCYIDNDGYIFVVDRLKELIKYKGYQVPPSELEALLLTHPEIADAAVIPFPDKEVGQFPMAYVVRKAGSDLSESAVMELIAKQVAPYKRIRRVTFVAAIPKNPSGKILRKDLVKLATSKL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02357 344 FunFam 4-coumarate--CoA ligase 2 242 343 - -
Eupl03g02357 344 Pfam AMP-binding enzyme C-terminal domain 255 330 IPR025110 -
Eupl03g02357 344 Gene3D - 196 241 IPR042099 -
Eupl03g02357 344 Gene3D - 1 172 IPR042277 -
Eupl03g02357 344 Gene3D - 242 343 IPR045851 -
Eupl03g02357 344 SUPERFAMILY Acetyl-CoA synthetase-like 197 341 - -
Eupl03g02357 344 PANTHER IST1 FAMILY MEMBER 3 215 IPR005061 GO:0015031
Eupl03g02357 344 FunFam IST1-like protein isoform A 1 173 - -
Eupl03g02357 344 Pfam Regulator of Vps4 activity in the MVB pathway 3 163 IPR005061 GO:0015031
Eupl03g02357 344 Pfam AMP-binding enzyme 200 246 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02357 Eupl-Chr3 54809569 54815293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02357 197 344 Monolignol Biosynthesis Gene Families AT1G20480 74.324 3.60e-76 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02357 - - ming:122064686 337.421