Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02355 ATGAACCAAGCAATCTATAGCTTTCAAACCTTCAATTCTAGCCCTTCAAACCAGCCAATCCAAGCTTCCAAACCAACTTGGAGGAACAAAAAGGAAAAGAAGGATCCTAGTATCATGAGAAGCTCCAAGAAGCTAAGTGAGATCATAGGGAAATGGAGGAAGAGAAGGAAGGGTCATTTTGTTGTTTATGCCAAAGAGGGAAAGAGGTTTGTTGTGCCTCTGTATTATTTGAATCACCCCATCTTCAGAGTGCTCTTGGAGATGGCCGAAGAGGAGTTCGGTTTGACGGCTCATGGCCCTCTGCAAGTTCCTTGTGAGGAAGAGATGATGGACTACATTGTCTCTTTGCTAAGGAAGAATCCACCTGTGGAAGTAGAGAAAGCCATTGTTTCCATTACCACTTGTAGACGACCTTCATCTTATGGGACCATGGTTTCATAA 441 0.4354 MNQAIYSFQTFNSSPSNQPIQASKPTWRNKKEKKDPSIMRSSKKLSEIIGKWRKRRKGHFVVYAKEGKRFVVPLYYLNHPIFRVLLEMAEEEFGLTAHGPLQVPCEEEMMDYIVSLLRKNPPVEVEKAIVSITTCRRPSSYGTMVS* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02355 146 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 31 134 IPR003676 GO:0009733
Eupl03g02355 146 MobiDBLite consensus disorder prediction 9 39 - -
Eupl03g02355 146 Pfam Auxin responsive protein 55 117 IPR003676 GO:0009733
Eupl03g02355 146 MobiDBLite consensus disorder prediction 9 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02355 Eupl-Chr3 54797843 54798354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02355 57 120 Calmodulin-binding Proteins AT5G20810 46.154 4.47e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02355 - - tcc:18591664 166.392