Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02352 ATGATCAACACCAAGAGGCTTGTTTCGATGGCAAGAACGTGGCAGAAGTTAGCTGCCATGGGGAGGAGAAGAATCTCGTTACCGAGAACCAAAGTCAGTCTAGATGCTGAGAAGTATAATAAACCGGTGGCAAACAAGGGCCATTTTGTTGTGTACACTGCTGATGAGAGACGTTTTGTGATTCCTTTGGCGTATCTCACCAACAGCATATTTAGAGAGCTCTTCAAAATGTCTGAAGAGGAATTTGGACTACCGAGCGCCGGACCTATCACCTTGCCATGCGATGCGGTCTTTATGGTGTATGTTGTCTCATTGGTTCAAAAGCGTGTATCTAAAGATCTGGAGAAGGCTTTGCTGATCTCCATGGCAACCTGCCGGTGCTCAGTAGCTTCTTCACGAGAACAGAACAACCATCAATTACTTCTCCAAGGCTTTTGA 438 0.4589 MINTKRLVSMARTWQKLAAMGRRRISLPRTKVSLDAEKYNKPVANKGHFVVYTADERRFVIPLAYLTNSIFRELFKMSEEEFGLPSAGPITLPCDAVFMVYVVSLVQKRVSKDLEKALLISMATCRCSVASSREQNNHQLLLQGF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02352 145 Pfam Auxin responsive protein 6 105 IPR003676 GO:0009733
Eupl03g02352 145 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02352 Eupl-Chr3 54786553 54786990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02352 46 114 Calmodulin-binding Proteins AT5G20810 40.000 1.28e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02352 - - vvi:100265824 186.422