Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02336 ATGGAAGCTCTCTTCGTAAACCAATCTCCCTCCCGTCTCAAGCTCTTCTCCAAACCCATTCCCTCTTCTCAGCAAACCACCACTCCTACCCTTCTAGCTCCCCGTCTCCGCTCTTTCTCTCGATTTAACCTCACAGCTTCCGCCATCGAGAACCAACAACAAGAAGCTCAACGAACCTCATTCTTTGCAGATCAAGAGGGACTCATTGAAGAGGAAGAACAACCCCAAGAAGAAGAAGAAGAAGAAGAATTCTTCGGTGAAGTAAACAGAATCATCGGAAGCAGGGCCATCGAAGGGTCTACCGGAATGGAGTACTTGATCGAATGGAAAGATGATCACACCCCATCATGGGTCCCATCCTCCAACATCGCCAAAGACGTGGTTGCAGAGTACGAAACCCCTTGGTGGACCGCAGCCAAGAAAGCAGACGAAGCCGCTCTCCAACAATTAATATACCCGAACAACGATGGAGAAGACCAAATAGGCGGTAGAGACGTCGATGCGGTGGACGGAGATGGACGCACTGCGCTCCTCTTTGTCGCCGGCCTAGGCTCCGAACCCTGCGTGCGCCTGCTAGCCAGTGCTGGCGCGAATCCTAACCACAGAGACAATAGTGGCGGTCTAACAGCCCTCCACATGGCCGCTGGATATGTTAAGCCCGGTGTAGCGCGGGTGTTGATTGAGCTCGGTGCAGATCCCGAAGTCGAAGATGATAGGGGACGTACGCCGTTGGATCTTGCGAGGGAGGTTCTGATGGCGACACCAAAGGGGAACCCGATGCAGTTCGCGAGGAGGTTAGGGCTCGAGACTGTGATTAAGGCTTTAGAGGAGGCGATCTTCGAGTACGCTGAGGTGGAGGAGATATTGGAGAAGAGAGGGAAGGACGATAAGGTGGAGTATTTAGTGAGATGGAAGGATGGCGGACCGAACGAGTGGGTGAAAGCTGGTTTGATTGCGGAGGACCTAGTGAGAGATTTCGAGGCTGGGCTAGAATACGCCGTAGCGGAAGGCGTGGTGGGTAAGAGGGAAGGAGAGGATGGGAAGAGAGAGTATCTGGTGAAGTGGACAGATATCGAAGAGGCTACATGGGAGCCCGAGGAGAACGTTGATCCTGAGTTGATCAAGGTGTTTGAACTGAGAGAGGCGGGTGAGGATGTGGGACCGCTACCGTTTGCGTCGCAGGATGCAATCGGGTCGTGA 1200 0.535 MEALFVNQSPSRLKLFSKPIPSSQQTTTPTLLAPRLRSFSRFNLTASAIENQQQEAQRTSFFADQEGLIEEEEQPQEEEEEEEFFGEVNRIIGSRAIEGSTGMEYLIEWKDDHTPSWVPSSNIAKDVVAEYETPWWTAAKKADEAALQQLIYPNNDGEDQIGGRDVDAVDGDGRTALLFVAGLGSEPCVRLLASAGANPNHRDNSGGLTALHMAAGYVKPGVARVLIELGADPEVEDDRGRTPLDLAREVLMATPKGNPMQFARRLGLETVIKALEEAIFEYAEVEEILEKRGKDDKVEYLVRWKDGGPNEWVKAGLIAEDLVRDFEAGLEYAVAEGVVGKREGEDGKREYLVKWTDIEEATWEPEENVDPELIKVFELREAGEDVGPLPFASQDAIGS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02336 399 Gene3D - 130 278 IPR036770 -
Eupl03g02336 399 SMART ANK_2a 206 235 IPR002110 GO:0005515
Eupl03g02336 399 SMART ANK_2a 172 201 IPR002110 GO:0005515
Eupl03g02336 399 ProSiteProfiles Ankyrin repeat region circular profile. 206 238 - -
Eupl03g02336 399 ProSiteProfiles Ankyrin repeat profile. 206 238 IPR002110 GO:0005515
Eupl03g02336 399 ProSiteProfiles Chromo and chromo shadow domain profile. 333 369 IPR000953 -
Eupl03g02336 399 SUPERFAMILY Chromo domain-like 281 329 IPR016197 -
Eupl03g02336 399 CDD CD3_cpSRP43_like 330 379 IPR030300 -
Eupl03g02336 399 ProSiteProfiles Chromo and chromo shadow domain profile. 283 312 IPR000953 -
Eupl03g02336 399 Gene3D - 329 380 - -
Eupl03g02336 399 Gene3D - 279 328 - -
Eupl03g02336 399 Gene3D - 83 129 - -
Eupl03g02336 399 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Eupl03g02336 399 SMART chromo_7 281 331 IPR000953 -
Eupl03g02336 399 SMART chromo_7 332 382 IPR000953 -
Eupl03g02336 399 SMART chromo_7 85 136 IPR000953 -
Eupl03g02336 399 PANTHER MYOTROPHIN 46 304 - -
Eupl03g02336 399 SUPERFAMILY Chromo domain-like 331 378 IPR016197 -
Eupl03g02336 399 SUPERFAMILY Chromo domain-like 85 135 IPR016197 -
Eupl03g02336 399 Pfam Ankyrin repeats (many copies) 192 247 IPR002110 GO:0005515
Eupl03g02336 399 Pfam Chromo (CHRromatin Organisation MOdifier) domain 336 378 IPR023780 -
Eupl03g02336 399 CDD CD2_cpSRP43_like 85 133 - -
Eupl03g02336 399 SUPERFAMILY Ankyrin repeat 131 249 IPR036770 -
Eupl03g02336 399 ProSiteProfiles Ankyrin repeat region circular profile. 172 204 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02336 163 247 CAMTA Transcription Factor Family AT5G09410 38.462 4.56e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02336 K12271 - nnu:104604351 545.814