Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02329 ATGGTGTCGGAAGACTCGGAACCCATTTCGTTTACGATGGTCGGATCTTCAAGGCTAGACCGCCGAATCACATTAATTCTTGGAAGCAAACCAGCAAAGAAAAGGACGATCATCGTTGGTCTGAAATCCCACAACTCTAGTAGAGAAATGCTGCTTCGCTTACTTACTTTGCTGGTCTACCCAGGGGATAATGTGGTGGCCGTCCATGTACAAGATCCCATCGACACTTTTGACCCAAACACCTTCCACATCCATGAAGATCTCTGCAAATCCAAACAGGTGGATTTCCAAGTTAAGGTTTGTAATGGAGACTCCTTTATTGCGGTTTTAGCGCATCAAGTAAGACTACACTTTGCAACGATGTTGGTACTTGGATGCAGCAGCCCAAGGCCCAAAGAACACATTGCTGCTTCTTGCCTGAAAGGACTGCCTCCCACTTGCTCCCTTCTTGTTTTGGACAACCGAGGAAGAGTCCTAATAAAAAAGCAGGGGACTTCACAACAAGGTTCCACAAGTAAACCCCTTCAACCTTCTTCTCTGTCATCTTCGACACAAACTTCTCGTTTAAATCACTCAGAACTCGGTGGCCAGTCTCCGAGGTCATTAGCCGTGACCTCTTCCTCAAAATCCTCACCACTAAGACATGCTGTTGTGGGAGTAAACAATGTCAGGAACGCAGTGCAGCTTCCTGATACCATGTTACAGAAACAGTTCCAGAAATTGGCACTCTTAGAAGCCAAGGGAGCCGGCAGGAGATTCACTCCACAAGAGCTCGGCTTAGCAACCGAAAACTTTAGTCCTCAGATGGTGATCGGTGAGGGTGGGTATAGTAAGGTGTACAGAGCTAACCTTCGAGAAGGCCAGGCTGCAGCTGTGAAAGTTCTTAAGATCACACAGCGGTCGGGGGAGGAACTTCTTCAGGAAGTGGAGATATTAAGCAATTTAAATCAGGAGAACATAATTCAGCTCATCGGCTACTGCTACAGTACAGATATGCATGCGGTCGTTTATAAGCTACTACAGGGGAGCTTGAAGCAGAACCTGACACAGCTCGGATGGAGTGAGAGGATGAAGGTTGCGGTTGGTGTGGCAAAGGCACTGGAACACCTTCATCATTCTTGCTCCCCACCTATCATCCATAGAGATGTCAAGTCCTCCAATGTGCTTCTCTCTCGCCATTGCCATCCTCATTCACCTTCAATTCTTCCTCAACTGTCGGATTTTGGAGCAGCAATGGTACAGCATCAACCTCAGCAATCTTCAGCAACCACAAAGGCGTTCCATGTGGTGGGGACCTTCGGATACTTGGCTCCAGAGTACATGATGTATGGGAAGGTTGATGAGAAGATAGACGTGTACTCCTATGGGGTTGTGCTCTTGGAACTCATCACTGGGAAAGAGGCCATCCAAACTGATCTAGCATCCAATCATGAAAGCTTAATACTCTGGGCAAGGTCCTTACTCAGTCGAGGATTATGCGAACGGCTAATAGATCCCCAATTGAATGAAGACTATGACAAAGAGGAGATGCAGAGGATGATGCTTGCAGCACGTCTCTGCCTCATGCATTCGTCTTCTAGAAGGCCAACGATGAAAACAATTCTGAAGTTATTAGAGGAGCCAGAGTATTGGCAAAAGATGCAGAGGGAGAGAGAAGAGTTAATCAACGGGGTCAGTTTCAAAGGTGAACCAGGATTGCAGAGACATGATGATGACTTAGCCACTTATGGAATTCCAATTGTGGACGACACCTAG 1755 0.4695 MVSEDSEPISFTMVGSSRLDRRITLILGSKPAKKRTIIVGLKSHNSSREMLLRLLTLLVYPGDNVVAVHVQDPIDTFDPNTFHIHEDLCKSKQVDFQVKVCNGDSFIAVLAHQVRLHFATMLVLGCSSPRPKEHIAASCLKGLPPTCSLLVLDNRGRVLIKKQGTSQQGSTSKPLQPSSLSSSTQTSRLNHSELGGQSPRSLAVTSSSKSSPLRHAVVGVNNVRNAVQLPDTMLQKQFQKLALLEAKGAGRRFTPQELGLATENFSPQMVIGEGGYSKVYRANLREGQAAAVKVLKITQRSGEELLQEVEILSNLNQENIIQLIGYCYSTDMHAVVYKLLQGSLKQNLTQLGWSERMKVAVGVAKALEHLHHSCSPPIIHRDVKSSNVLLSRHCHPHSPSILPQLSDFGAAMVQHQPQQSSATTKAFHVVGTFGYLAPEYMMYGKVDEKIDVYSYGVVLLELITGKEAIQTDLASNHESLILWARSLLSRGLCERLIDPQLNEDYDKEEMQRMMLAARLCLMHSSSRRPTMKTILKLLEEPEYWQKMQREREELINGVSFKGEPGLQRHDDDLATYGIPIVDDT* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02329 584 Gene3D Phosphorylase Kinase; domain 1 237 338 - -
Eupl03g02329 584 MobiDBLite consensus disorder prediction 162 208 - -
Eupl03g02329 584 ProSiteProfiles Protein kinase domain profile. 265 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02329 584 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 333 552 - -
Eupl03g02329 584 SMART serkin_6 265 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02329 584 SUPERFAMILY Protein kinase-like (PK-like) 251 538 IPR011009 -
Eupl03g02329 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Eupl03g02329 584 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Eupl03g02329 584 Pfam Protein kinase domain 268 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02329 584 Gene3D Transferase(Phosphotransferase) domain 1 339 560 - -
Eupl03g02329 584 PANTHER OS08G0249100 PROTEIN 171 549 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02329 Eupl-Chr3 54536866 54543430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02329 253 558 Trihelix Transcription Factor Family AT5G38560 38.486 5.20e-62 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl03g02329 Pkinase 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02329 - - nnu:104603699 729.169