Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02312 ATGACGACCATCTCCCTCTTCTCCTCCTCACTTCCTCTGCTTCTTCTTCGTCCTCAAAACCTAAATAGGCATTTATCAGCGGCTACAAAGCTGCAATGCCAGCTCCCAAAAGTACTTAACAGAAACCGGATTGGTACGAATTTCAGGTTGATTGCATTTGCCGCAGGAGGAGATTCAGAAAATATTGGAGTTCCGAGGTCGGTGCCGGTTCGTGTAGCACACGAGCTTCTTCAAGCGGGACACCATTATTTGGACGTCAGAACTACTGAAGAATTCAATGCTGGACATGCTTCAGGGGCTACAAATGTTCCCTACATGTTCAAAGTTGGAGCTGGGATGACGAAAAATCCTAATTTCTTGGAGGAAGTATCAAAACATTTTGGAAAGGATGATGAGATAATTGTGGGATGCCAGAGTGGAAAGAGGTCACTCATGGCTGCAACTGATCTTTCATCTGCTGGTTTTAGTGGCATCACTGACATAGCCGGTGGGTATTCTGCATGGACACAAAACGGACTTCCTACAGAGTAG 531 0.4576 MTTISLFSSSLPLLLLRPQNLNRHLSAATKLQCQLPKVLNRNRIGTNFRLIAFAAGGDSENIGVPRSVPVRVAHELLQAGHHYLDVRTTEEFNAGHASGATNVPYMFKVGAGMTKNPNFLEEVSKHFGKDDEIIVGCQSGKRSLMAATDLSSAGFSGITDIAGGYSAWTQNGLPTE* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02312 176 Gene3D - 56 176 IPR036873 -
Eupl03g02312 176 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 38 176 - -
Eupl03g02312 176 SMART rhod_4 67 174 IPR001763 -
Eupl03g02312 176 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 64 175 IPR036873 -
Eupl03g02312 176 CDD RHOD 73 168 - -
Eupl03g02312 176 ProSiteProfiles Rhodanese domain profile. 77 176 IPR001763 -
Eupl03g02312 176 Pfam Rhodanese-like domain 75 170 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02312 Eupl-Chr3 54297148 54301703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02312 67 174 Sulfurtransferasese or Rhodanese AT5G66170 49.091 2.43e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02312 - - ming:122083135 224.557