Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02309 ATGGGAATGCACTGGAATTGGGTCGGCATTGTCCGGAGAAAGTTTGCCAGATCCCCGCCACAGAAAACGATCATCGTTCTCCACGCCAATAACACCGAAAGCCTCAGAGAAGAAGAAGAGAAGGGTTTTGAAGAAATCGTAAACTTCAAAGAGGGTGGTGTTGTTGATGATGCTGGTTTATCGTTGAAGAAGAAAGAGTTCTCCGAAGAAGACATTGCCGCCATAAAAATCCAAGCGTTTTTCAGGGGTTATCTGGCAAGACAAGCATTTCGAGCACTGAGGAGCCTGGTGAAACTGCAAGCTGTGGTTCGTGGGATGTTCGTGAGGAAGCAAGCACGAGTCGCTCTGCATTGCATGCACGCCCTTGTCCGCTTGCAAGTGAGGGTTCGAGCCAGGCAGCTGCTCAGCAGGGTAGGTGACGATGATTCATGA 432 0.4977 MGMHWNWVGIVRRKFARSPPQKTIIVLHANNTESLREEEEKGFEEIVNFKEGGVVDDAGLSLKKKEFSEEDIAAIKIQAFFRGYLARQAFRALRSLVKLQAVVRGMFVRKQARVALHCMHALVRLQVRVRARQLLSRVGDDDS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02309 143 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Eupl03g02309 143 Pfam IQ calmodulin-binding motif 73 91 IPR000048 GO:0005515
Eupl03g02309 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 114 IPR027417 -
Eupl03g02309 143 Gene3D - 70 120 - -
Eupl03g02309 143 ProSiteProfiles IQ motif profile. 94 121 IPR000048 GO:0005515
Eupl03g02309 143 PANTHER IQ-DOMAIN 5-RELATED 40 134 - -
Eupl03g02309 143 SMART iq_5 92 113 IPR000048 GO:0005515
Eupl03g02309 143 SMART iq_5 69 91 IPR000048 GO:0005515
Eupl03g02309 143 ProSiteProfiles IQ motif profile. 70 98 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02309 Eupl-Chr3 54287852 54288532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02309 66 136 IQD Protein Family AT3G51380 78.873 8.67e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02309 - - rcu:8267089 130.954