Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02307 ATGAGAAGGATATCTGCGGGAGGAGTAGAACAAGAACAAGACAACGAAGAGCAGCCCATCCTCTGCGATCACGACGACCGCCACTTGATGAAATCCGTTGATTCGGGCGACCGCAGAGAGGTGGTCGTCAAGATCGACGGCAACAATAGCAATGGTAATAATACCAGAGATGTTGAGCTTGTTGTGGATAGCAATGAGAATAAGATATGGAGGGAATCAAGCTATGAGTTCTGGAAAGATTCCGGTCCGACGAACAGAGATGGAGGCAATGCGGGCCGCAGTGGCACAGGTGACGGGTTTCATTTTCAACAACGCGCACAACAAGGGACGGATGATCCGCCTACGAAGCTTATCGGGCAGTTCTTGAATAAGCAGAAGTCTTCGGGGAAGATGTCATTAGATATGGATTTGGAGATGGACGAGCTTCGTCAGGATCGCATCCTACCCCCCGTCCCAGAGGGAGGAACTGATCTACACGATCAAATGGTTGCAATCATCCCATTAGGTTGA 510 0.498 MRRISAGGVEQEQDNEEQPILCDHDDRHLMKSVDSGDRREVVVKIDGNNSNGNNTRDVELVVDSNENKIWRESSYEFWKDSGPTNRDGGNAGRSGTGDGFHFQQRAQQGTDDPPTKLIGQFLNKQKSSGKMSLDMDLEMDELRQDRILPPVPEGGTDLHDQMVAIIPLG* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02307 169 MobiDBLite consensus disorder prediction 100 116 - -
Eupl03g02307 169 MobiDBLite consensus disorder prediction 1 22 - -
Eupl03g02307 169 MobiDBLite consensus disorder prediction 78 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02307 Eupl-Chr3 54276143 54281367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02307 32 154 Mechanosensitive Ion Channel Family AT1G78610 44.444 2.57e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02307 K22048 - ming:122083147 144.05