Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02306 ATGGCGATGGAAGATAACGAGAGTTGCAGTAGCAGAACTGTGGATTCATCGCCAACGCATCCTCGGCAGCAGAGAAAGAAGCTTGAGGTTTACAACGAGGTTCTTCGTCGACTGAAGGATTCGAATGACGAAGAGGCGAATCTTCCCGGTTTCGAGGATGAGCTCTGGGCTCATTTTAGACGACTGCCGGCTAGGTATGCACTGGATGTGAATGTGGAGAGGACAGATGATGTTCTCACTCACAAGAGATTACTGCAACTGGCGCATGACCCTGCTAGTAGACCTGCATTTGAAGTCCGTCTTGTGCAGGTTACTCCTGTCTCTGATGGCAATTTAGTTGATTCTTTTCTTTCGAACTCTCCAAAAGACGATGCTCAAAGTCCATCTAATTTCCCTAGCAGACAGAGCATTCATCCACCACCTGCTTTTGGTTCATCACCTAATCTCGAAGCCCTTGCAATTGCACCACCCAACAAATCACATGTTCAAGATGGAGACAGCTCGGTGAATGCAAATCGATGCTTTGCCCGGCCCATGCATGAAATCACCTTTTCAACAGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCATTGCTTGCTGAGATTGGTCTGAACATTCAAGAGGCACATGCTTTTTCCACAGTGGATGGCTACTCCTTGGATGTCTTTGTTGTTGATGGTTGGCCGTACGAGGAAACCGAACAGCTTAGACATGCACTGGAAAAGGAAATGTTAAAGATCGAGAACAAATCTTGGTCGAAACCTCATATATTATCTTCTATCAGCAAGAATGGACAAAGTGGGATGGGTTCAATCCCTGATCGTGTAAAAATACCTACTGATGAGACTGATGTCTGGGAAATTGATATTAGGTTGTTGAAGTTCGAAAACAAAGTTGCATCCGGGTCATTTGGAGATCTGTACAAAGGTACCTATTGTAGCCAGGAAGTGGCTATTAAAGTCCTCAAGCCAGAGCGTGTAAATGCGGATATGCAGCGAGAATTTGCCCAGGAAGTCTATATTATGAGGAAAGTTCGGCACAAGAATGTTGTGCAATTTATTGGTGCATGTACCAGACCTCCTAGCTTGTGCATTGTGACAGAATTTATGTCTGGTGGAAGTGTGTATGATTTTCTGCATAAACAAAAAGGTGTCTTTAAACTTCCATCCCTGCTCAAAGTGGCGATTGACATTTCCAAGGGAATGAACTACTTGCACCAAAATAATATAATCCACAGGGACTTGAAGGCTGCCAATCTTCTGATGGATGAAAACGAAGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGGGTGCAAGCTCAATCTGGAGTGATGACTGCAGAAACTGGAACATATCGTTGGATGGCTCCTGAGGTCATAGAACACAAGCCATATGATCACAAGGCTGATGTTTTCAGTTTCGGAATCGTGCTATGGGAGCTGCTAACAGGAAAGCTTCCATATGACTACTTAACCCCGTTACAAGCAGCAGTAGGCGTGGTCCAAAAGGGTCTAAGGCCTACAATCCCGAAGCACACGCATCCGAAGCTTGATGAACTGCTCGAGAGATGTTGGCAGCAAGACCCAACTTTGAGGCCTGACTTCTCCGAAATTATAGAGATCCTGCTGCAAATAGCCAAGGAGGTTGGGGACGACGGTGAGGATCGGCGCAAGGAGAAATCAGGCGGATTCCTTTCAGTTCTTAGACGGAATAACCACTGA 1725 0.4545 MAMEDNESCSSRTVDSSPTHPRQQRKKLEVYNEVLRRLKDSNDEEANLPGFEDELWAHFRRLPARYALDVNVERTDDVLTHKRLLQLAHDPASRPAFEVRLVQVTPVSDGNLVDSFLSNSPKDDAQSPSNFPSRQSIHPPPAFGSSPNLEALAIAPPNKSHVQDGDSSVNANRCFARPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETEQLRHALEKEMLKIENKSWSKPHILSSISKNGQSGMGSIPDRVKIPTDETDVWEIDIRLLKFENKVASGSFGDLYKGTYCSQEVAIKVLKPERVNADMQREFAQEVYIMRKVRHKNVVQFIGACTRPPSLCIVTEFMSGGSVYDFLHKQKGVFKLPSLLKVAIDISKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYDYLTPLQAAVGVVQKGLRPTIPKHTHPKLDELLERCWQQDPTLRPDFSEIIEILLQIAKEVGDDGEDRRKEKSGGFLSVLRRNNH* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02306 574 SUPERFAMILY Protein kinase-like (PK-like) 279 543 IPR011009 -
Eupl03g02306 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Eupl03g02306 574 Coils Coil 231 251 - -
Eupl03g02306 574 MobiDBLite consensus disorder prediction 1 18 - -
Eupl03g02306 574 MobiDBLite consensus disorder prediction 1 28 - -
Eupl03g02306 574 Gene3D Phosphorylase Kinase; domain 1 283 372 - -
Eupl03g02306 574 FunFam serine/threonine-protein kinase HT1 373 563 - -
Eupl03g02306 574 SUPERFAMILY ACT-like 179 244 IPR045865 -
Eupl03g02306 574 ProSiteProfiles ACT domain profile. 181 256 IPR002912 -
Eupl03g02306 574 CDD ACT_TyrKc 179 246 - -
Eupl03g02306 574 MobiDBLite consensus disorder prediction 113 133 - -
Eupl03g02306 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 140 546 - -
Eupl03g02306 574 ProSiteProfiles Protein kinase domain profile. 294 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02306 574 SMART serkin_6 294 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02306 574 CDD STKc_MAP3K-like 300 543 - -
Eupl03g02306 574 Pfam Protein tyrosine and serine/threonine kinase 294 543 IPR001245 GO:0004672|GO:0006468
Eupl03g02306 574 FunFam Serine/threonine-protein kinase isoform 1 284 372 - -
Eupl03g02306 574 MobiDBLite consensus disorder prediction 113 149 - -
Eupl03g02306 574 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Eupl03g02306 574 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Eupl03g02306 574 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Eupl03g02306 574 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Eupl03g02306 574 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Eupl03g02306 574 Gene3D Transferase(Phosphotransferase) domain 1 373 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02306 Eupl-Chr3 54252818 54273469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02306 4 573 MAP Kinase Kinase Kinase AT4G35780 69.808 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl03g02306 PK_Tyr_Ser-Thr 5.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02306 - - msin:131237127 971.459