Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02303 ATGATGCGTGCCTTGCAAAATCAACCGGGCGGTTATCCGGTGGAGCTACCGTATGGATACTATCCCAGCGAAGTATCCCCCGATTGGTTGAACAGGGCTGATAACGCCTGGCAGATAACGGCGGCAGCTTTGGTGGGTCTACAGAGCGTCCCAGGCCTCATCATCCTCTACGGTAGCATGGTTAAAAAGAAATGGGCCGTTAACTCCGCTTTCATGGCTCTCTACGCCTTCGCTGCGGTCCTCCTATGTTGGGTACTTTGGGGCCATCGCATGTCCTTCGGCACCACCGGCGGCACTCATTTGTCCGGTTTACCTGATATCGCTCTCAAGCAAAGATACCTCCTTCAACAGTTAAACGGTTATTACGTCCCAATGTCTACTTACGTGTTCTATGAGTTCGCCTTCGCTGCCATTACCGTTATATTGTTGGCAGGATCATTGCTTGGGAGGATGAACTTCTATGCTTGGATGCTCTTCGTTCCAATGTGGCTTACCTGCTCCTACACCGTTGGTGCCTACGCCATATGGGGACCAGGATTTCTTGATCCTAAAAAAGGATTTCTTGAAATTAATGAAGGTGGACTCGTTGATTTCTCTGGAGGTTATGTTATTCATCTTTCATCTGGTGTCGCCGGCTTCACTGCCGCTTATTGGGTGGGACCCAGGCATTCTCATGACAGGCAGCACTTTCCTCCAAACAACATAATTCACATGTTGGGAGGTGCAGGCTTCCTTTGGCTGGGGTGGAGCGGCTTCAATGGAGGGTCGCCAATGGCAGCCAACATGATCGCATCTCTCGCCATTCTCAACACCCATTTGTGCACCGCAGTCAGCCTCTTGGTGTGGTTGTCGTTGGATATGATCATATACGGAAAGAGTTCTGTTATCGGCGCAGTGCAAGGGATGATCACGGGCCTCGTCTGCATCACCCCTGGTGCAGGGTTGGTGGAGCCATGGGCAGCAATGGTGATGGGCACCATGTCTGGTTCACTAACATGGTACACGATGATGGTCCTACACAAGAAATCAGCCTTCTTCCAAAAGGTAGACGACCCCTTAGGTGTGTTCCACACGCATGCCGTGGCTGGCACGTTGGGTGGGCTCCTCTCCGGCTTCTTTGCGAAGCCGGCCTACTTGAGAATGTTCTATGGCAAAACAGACCATTATGGACTAATGTACAGCCTATTCGACGGGAAAGGGAATACCATCCAGGGTCTGCGCCAGATGGCTTACCAGCTCATCGGAGCCGCTTTCGTTACTATATGGAACGTCATTGTCACAAGCCTTATCTGTATTTTTCTTAGTCGAATCGTTAATCTTAGGATGGACGATGATGATCTTCGTATAGGGGATGATGCTGCACATGGGGAGGAAGCCTATGCCGTATGGGGAGATGGAGAGAGGATGGCTACCCCTATGCGCTTATCCATGACCCCTAAACTTCCTTCGTTTTGTCGTCGTTAG 1464 0.5089 MMRALQNQPGGYPVELPYGYYPSEVSPDWLNRADNAWQITAAALVGLQSVPGLIILYGSMVKKKWAVNSAFMALYAFAAVLLCWVLWGHRMSFGTTGGTHLSGLPDIALKQRYLLQQLNGYYVPMSTYVFYEFAFAAITVILLAGSLLGRMNFYAWMLFVPMWLTCSYTVGAYAIWGPGFLDPKKGFLEINEGGLVDFSGGYVIHLSSGVAGFTAAYWVGPRHSHDRQHFPPNNIIHMLGGAGFLWLGWSGFNGGSPMAANMIASLAILNTHLCTAVSLLVWLSLDMIIYGKSSVIGAVQGMITGLVCITPGAGLVEPWAAMVMGTMSGSLTWYTMMVLHKKSAFFQKVDDPLGVFHTHAVAGTLGGLLSGFFAKPAYLRMFYGKTDHYGLMYSLFDGKGNTIQGLRQMAYQLIGAAFVTIWNVIVTSLICIFLSRIVNLRMDDDDLRIGDDAAHGEEAYAVWGDGERMATPMRLSMTPKLPSFCRR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02303 487 Pfam Ammonium Transporter Family 36 460 IPR024041 GO:0008519|GO:0016020|GO:0072488
Eupl03g02303 487 ProSitePatterns Ammonium transporters signature. 197 222 IPR018047 GO:0008519|GO:0016020|GO:0072488
Eupl03g02303 487 PRINTS Rhesus blood group protein signature 322 340 IPR002229 GO:0005886
Eupl03g02303 487 PRINTS Rhesus blood group protein signature 267 289 IPR002229 GO:0005886
Eupl03g02303 487 PRINTS Rhesus blood group protein signature 236 254 IPR002229 GO:0005886
Eupl03g02303 487 PRINTS Rhesus blood group protein signature 132 148 IPR002229 GO:0005886
Eupl03g02303 487 PANTHER AMMONIUM TRANSPORTER MEP2 21 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
Eupl03g02303 487 NCBIfam ammonium transporter 34 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Eupl03g02303 487 Gene3D Ammonium transporter AmtB like domains 21 464 IPR029020 -
Eupl03g02303 487 SUPERFAMILY Ammonium transporter 29 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02303 Eupl-Chr3 54209846 54214129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02303 125 468 Inorganic Solute Cotransporters AT2G38290 57.849 1.08e-133 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02303 K03320 - egt:105974970 709.909