Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02296 ATGGCGGACAATTCTTCTTCAGACCAGATAATCTTCCTTCATGGAGACCTTGATTTGAAAATTATCGCAGCTCGAAGCTTACCAAACATGGATTTAGTTTCCGAGCGTTTCCGCCGTTGCTTCACTGCCTGCGACACCTGCCGAGTTCCTTGCGCCTCTGGTGAGCCTGAGCGGAAGTCTCATCCCCACCGGAAAATTATCACTAGCGACCCTTACGTCACTGTCTGCCTCTCCGGTGCTACCGTCGCTCGGACTCGAGTTTTACCTAACTCTCAAAATCCTACCTGGAACGAACGCTTCAAAATCCCGCTCGCTCACCCAGTATCCCACGTTGAGTTTCAGGTGAAGGATAATGATATGTTCGGCGCTCAACTTATCGGAATCGTTTCGATTCCTGCTCAGAAAATCAGGTCTGGAATTTTTATTAGTGAGTGGTTTCCAGTGATCGATTCGTATGGGAAGCCGCCGAAGCCGGATTCGGCTCTTCATCTTGAAATGAAGTTTACGCCGGCTGAAGAAAATCCGTTGTATAAGCAGGGCATTGCGGGGGATCCGGAGCATTTGGGTGTTCGGAACACTTATTTTCCGCTCAGGAAAGGAGGGCTAGTGACACTTTATCAGGACGCTCACGTTCCCGATGGAATGCTACCGGAGATTAAATTGGAGGAGGGGAGGGTTTATCAGCATGAGAAGTGCTGGGAAGATATTTGTCATGCCATATCGGAGGCTCATCACATGATTTATATTGTTGGTTGGTCTATTTACCATAAGGTGAGGCTGATTAGAGAACCGACCAGGCCGTTGCCCCGCGGTGGCGATCTGACTCTTGGTGATCTGCTTAAGTATAAATCGGAAGAAGGAGTACGAGTGCTCATGTTGGTTTGGGATGATAAGACTTCCCACAATAAATTCTTCATCAATACGGCAGGAATGATGCAAACTCATGATGAAGAAACTCGGAAGTTTTTCAAGCATTCATCTGTCATTTGTGTGCTGTCACCTCGTTATGCCAGCAGTAAGCTTAGCATTTTCAAGCAACAGGTTGTTGGAACCCTCTTCACACACCATCAGAAATGTGTGCTTGTGGATACACAAGCATCTGGAAATAACCGAAAGATCACTGCTTTTTTGGGAGGTCTTGATCTTTGTGATGGCCGCTATGATACGCCTGAGCATCGACTATTTCGTGATCTTGATACTGTATTTAAGGATGATTATCACAACCCTACATTTCCTGCATCAACTAAGGGTCCAAGGCAACCATGGCACGATTTGCACTGTAAAATTGAAGGGCATGCTGCATATGATGTGCTTGCAAACTTTGAGCAGCGTTGGAGAAAAGCAACAAAATGGTCAGAGTTTGGACTGCGTTTCAAAAAGATATCTCATTGGCATGATGATGCTTTGATAAAGCTAGAGCGTATCTCATGGATACTTAGTCCTTCCCCATCTGTCCCAGATGATCCTATCGTATGGGTTTCCAAGGAAGTTGATCCTGAAAACTGGCATGTTCAGGTTTTCCGATCTATTGACTCTGGATCTGTAAAAGGATTTCCCAAAACTGTTCATGAAGCGGAGGCCCAGAACCTTGTCTGTGAAAAAAATCTGGTGATAGATAAGAGCATTCAAACAGGATACATCCAGGCGATTAGATCTGCCCAACACTTCATTTATATTGAAAATCAATATTTTATTGGATCATCTTATGGGTGGCAATGTTACAAAGAAGCAGGTGCTGATAATCTAATCCCAATGGAGTTGGCATTGAAGATTGCTAGTAAAATAAGAGCAAAGGAGAGATTTGCAGTGTATATTGTCATACCAATGTGGCCTGAGGGTGTCCCAAATTCTGCCCCCGTGCAAGAAATTCTCTTTTTTCAGAGCCAGACAATGGAAATGATGTATCAAATTGTTGCACAGGAGCTAAAACACATGCAGCTTGAGAATTCACATCCACAGGACTACCTGAATTTCTATTGTCTTGGTAATCGGGAAGAATTGCCCACGGAAATGTCGAGGTCAACCAGTCAACCTTCTGCTAATGGTGATGCGGCCTCGGCTGCCCAAAAATACCGGCGATTTATGATTTATGTGCATGCCAAAGGAATGGTAGTAGATGACGAGTATGTGCTTCTGGGGTCTGCCAATATAAACGAACGATCTTTGGCTGGTTCAAGAGACACTGAGATAGCTATGGCTGCGTATCAGCCGCATCATGCATGGGCTGTGAAGAAGAAACATCCACATGGCCAGATATATGGATATAGGATGTCTCTGTGGGCAGAGCACCTAGGGCTGCTAGATGATCAATTCAAGGAGCCCCACAGTTTGGATTGTGTGAAGCATGTGAACAAGGTAGCTGAAGAGAACTGGAAGAGGTTCACGGCTGAGGAGGTGACGCCTTTGTGTGGTCATCTTCTCAAGTACCCGATCCTGGTAGATGCTAATGGGAAAGTGGGGCCCTTACCTGGGCATGAGAATTTCCCGGACGTAGGTGGTAAGGTACTCGGAGCATACACCACTGGCCTTCCTGATGCTCTGACCACATAG 2550 0.4576 MADNSSSDQIIFLHGDLDLKIIAARSLPNMDLVSERFRRCFTACDTCRVPCASGEPERKSHPHRKIITSDPYVTVCLSGATVARTRVLPNSQNPTWNERFKIPLAHPVSHVEFQVKDNDMFGAQLIGIVSIPAQKIRSGIFISEWFPVIDSYGKPPKPDSALHLEMKFTPAEENPLYKQGIAGDPEHLGVRNTYFPLRKGGLVTLYQDAHVPDGMLPEIKLEEGRVYQHEKCWEDICHAISEAHHMIYIVGWSIYHKVRLIREPTRPLPRGGDLTLGDLLKYKSEEGVRVLMLVWDDKTSHNKFFINTAGMMQTHDEETRKFFKHSSVICVLSPRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQASGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFKDDYHNPTFPASTKGPRQPWHDLHCKIEGHAAYDVLANFEQRWRKATKWSEFGLRFKKISHWHDDALIKLERISWILSPSPSVPDDPIVWVSKEVDPENWHVQVFRSIDSGSVKGFPKTVHEAEAQNLVCEKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYGWQCYKEAGADNLIPMELALKIASKIRAKERFAVYIVIPMWPEGVPNSAPVQEILFFQSQTMEMMYQIVAQELKHMQLENSHPQDYLNFYCLGNREELPTEMSRSTSQPSANGDAASAAQKYRRFMIYVHAKGMVVDDEYVLLGSANINERSLAGSRDTEIAMAAYQPHHAWAVKKKHPHGQIYGYRMSLWAEHLGLLDDQFKEPHSLDCVKHVNKVAEENWKRFTAEEVTPLCGHLLKYPILVDANGKVGPLPGHENFPDVGGKVLGAYTTGLPDALTT* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02296 849 SMART C2_3c 16 145 IPR000008 -
Eupl03g02296 849 PIRSF PLD_plant 1 849 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Eupl03g02296 849 SUPERFAMILY Phospholipase D/nuclease 540 779 - -
Eupl03g02296 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 694 721 IPR001736 GO:0003824
Eupl03g02296 849 Pfam Phospholipase D Active site motif 352 386 IPR001736 GO:0003824
Eupl03g02296 849 Pfam C2 domain 15 148 IPR000008 -
Eupl03g02296 849 SMART pld_4 351 386 IPR001736 GO:0003824
Eupl03g02296 849 SMART pld_4 694 721 IPR001736 GO:0003824
Eupl03g02296 849 CDD C2_plant_PLD 13 169 - -
Eupl03g02296 849 Pfam PLD-like domain 547 738 IPR025202 -
Eupl03g02296 849 SUPERFAMILY Phospholipase D/nuclease 194 456 - -
Eupl03g02296 849 ProSiteProfiles C2 domain profile. 1 146 IPR000008 -
Eupl03g02296 849 PANTHER PHOSPHOLIPASE D 7 838 IPR015679 -
Eupl03g02296 849 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 351 386 IPR001736 GO:0003824
Eupl03g02296 849 Pfam Phospholipase D C terminal 768 838 IPR024632 -
Eupl03g02296 849 Gene3D Endonuclease Chain A 511 749 - -
Eupl03g02296 849 Gene3D C2 domain 14 179 IPR035892 -
Eupl03g02296 849 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 173 IPR035892 -
Eupl03g02296 849 Gene3D Endonuclease Chain A 219 463 - -
Eupl03g02296 849 FunFam Phospholipase D delta 223 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02296 Eupl-Chr3 54108654 54140666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02296 1 682 Phospholipase D Gene Family (Wang group) AT4G35790 68.714 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02296 K01115 - nnu:104604314 1420.22