Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02280 ATGGAGTTTTACGCCTACCCATCTCCTTCTCCAACTCCTTCTTTGAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGGGATTTGGGTTGATAGAGTTAGAGAAATTTGCAGCTCTCTGGTTTCTGCTGTTCTTGGGAACATTGTCTCTGCAATCTTCACCTTCTTTTTCGCAGTGGTGGGTTCTCTGTTAGGAGCCATGACTGGAGCTTTGATAGGCCAAGAAACTGAGAGTGGGTTCTTCCGAGGGGCTGCAGTTGGAGCCATTACTGGAGCTGTTTTCTCGATCGAGGTTTTCGAATCGTCTCTTGTTCTCTGGCAATCCGACACAGGAATTGGTTGTCTCCTTTATTTGATAGATGTTATTGCAAATCTTCTAAATGGAAGACTAGTTCGGGAGCAGGTCGGTCCAGCGATGTTAAGTGCAGTACAAAGTCAGATGGGTGCCATTGAAGTAAGCTTTGAAGAGGTTCCCGATATTTTCGAGACCAGTGAGGCGAAAGGTTTGTCGGAAGATTCAGTCGACAAAATCCCAAAGATCAAAATCACAACAAAGAACAATGTGGACACCTCTGGGGAGAGGATCTCCTGTTCGGTGTGCCTTCAGGACCTCCAGATCGGGGAGACGGTTCGAAGCTTGCCTCATTGTCATCACATGTTTCACCTACCTTGTATCGATAAGTGGCTCGTCAAGCACGGTTCCTGCCCACTATGCAGAAGGGATCTGTAG 735 0.4626 MEFYAYPSPSPTPSLNSSSSSSSSSSSFGIWVDRVREICSSLVSAVLGNIVSAIFTFFFAVVGSLLGAMTGALIGQETESGFFRGAAVGAITGAVFSIEVFESSLVLWQSDTGIGCLLYLIDVIANLLNGRLVREQVGPAMLSAVQSQMGAIEVSFEEVPDIFETSEAKGLSEDSVDKIPKIKITTKNNVDTSGERISCSVCLQDLQIGETVRSLPHCHHMFHLPCIDKWLVKHGSCPLCRRDL* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02280 244 FunFam NEP1-interacting protein-like 1 159 244 - -
Eupl03g02280 244 Pfam Ring finger domain 198 241 IPR001841 -
Eupl03g02280 244 MobiDBLite consensus disorder prediction 9 23 - -
Eupl03g02280 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 244 IPR013083 -
Eupl03g02280 244 ProSiteProfiles Zinc finger RING-type profile. 199 241 IPR001841 -
Eupl03g02280 244 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 33 243 IPR044523 -
Eupl03g02280 244 CDD RING-H2_NIPL1-like 198 241 - -
Eupl03g02280 244 SUPERFAMILY RING/U-box 198 244 - -
Eupl03g02280 244 SMART ring_2 199 240 IPR001841 -
Eupl03g02280 244 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02280 Eupl-Chr3 53864296 53865950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02280 32 244 C3H Transcription Factor Family AT5G66070 72.430 3.23e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02280 - - zju:107424444 367.466