Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02279 ATGGTTTTTGAAGGAACGTCAGGGATTGACAACAAATACACAACCTTGCAATTCACAGGGGAGGTTTTGAAAACTCCTGTCTCATTAGATATGCTTGGACGCATTTTTAATGGATCAGGGAAACCCATTGATAACGGCCCCCCTATTCTGCCTGAGGCTTACTTGGATATTTCCGGAAGTTCTATCAACCTGAGTGAGAGAACATATCCTGAAGAAATGATTCAGACAGGGATTTCAACAATTGATGTCATGAATTCCATTGCTCGAGGACAAAAGATCCCTCTTTTTTCTGCTGCTGGTCTTCCTCCTAACGAAATAGCTGCTCAGATCTGTCGTCAAGCTGGTCTCGTAAAGCAGTTAGAAAAGACTCAAAATCTCATGGAGGATCAGGAAGAGGACAATTTTGCCATTGTATTTGCAGCCATGGGAGCCAATGACCCGACCATTGAACGGATTATCACTCCTCGAATTGCTCTCACCACTGCAGAATATTTGGCTTATGAATGTGGGAAGCATGTTCTAGTCATACTAACTGATATGAGCTCTTATGCAGATGCACTTCGTGAGGAAGTGCCAGGTAGACGTGGGTATCCTGGATATATGTATACAGATCTGGCAACAATCTATGAGCGTGCTGGACGTATTGAAGGACGAAAAGGCTCCATCACACAAATTCCTATTTTAACTATGCCTAATGAAGATATAACACATCCCACTCCAGATCTTACTGGTTACATTACTGAGGGACAGATATATATTGATAGGCCGCTCCACAACCGACAGATATACCCACCAATCAATGTCCTCCCGTCGCTTTCACGATTAATGAAGAGTGCCATTGGTGAGGGGATGACTCGACGAGACCATGCTGATGTGTCCAACCAGCTATATGCAAATTATGCTATCGGGAAGGACGTCCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAGGACCTGCTCTATCTTGAGTTTTTAGACAAATTCGAGAGGAAGTTTGTTTCCCAAGGAGCCTATGACACACGCAACATCTTCCAGTCGCTTGATTTGGCATGGACACTGCTTCGTATTTTCCCCTGTGAGCTTCTCCACCGTATACCAGCAAAAACTTTAGACGCATACTACAGTCGTGATGCAACTAATTAA 1155 0.439 MVFEGTSGIDNKYTTLQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINLSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPPNEIAAQICRQAGLVKQLEKTQNLMEDQEEDNFAIVFAAMGANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNEDITHPTPDLTGYITEGQIYIDRPLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVSQGAYDTRNIFQSLDLAWTLLRIFPCELLHRIPAKTLDAYYSRDATN* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02279 384 CDD ATP-synt_V_A-type_beta_C 283 377 - -
Eupl03g02279 384 Coils Coil 113 133 - -
Eupl03g02279 384 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 144 382 IPR022879 -
Eupl03g02279 384 Gene3D - 1 384 - -
Eupl03g02279 384 CDD V_A-ATPase_B 22 281 - -
Eupl03g02279 384 ProSitePatterns ATP synthase alpha and beta subunits signature. 264 273 IPR020003 GO:0005524
Eupl03g02279 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 279 IPR027417 -
Eupl03g02279 384 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 77 273 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02279 Eupl-Chr3 53827399 53861987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02279 2 384 Primary Pumps ATPases(2) AT4G38510 87.770 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02279 K02147 - cpap:110818953 714.531