Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02276 ATGGAAGGAGAGAGGATGAGGAGGCGATCCTTCGGGGTTCTTCGGCAACGGTGGATGCGTAGAGTAGGGGGTTTGAAGAGTAAGAAAATGCATTTGAGACGGTTCCAATTGGAAGAACTTGAGAAGGCTACCAAGAATTTCAGCCAAGATTGCTTGATTGGGTCAGGAGCGTTCGGGAACGTTTATAAGGGAACGTTCGATGAAGAAGGATTGCTCGCGATCAAGAGGGCCCACGACGATTCTTATCAGAGTGTCCAGGAATTTCGAAATGAAGTAGAACTAATCTCGAGAGTAAAGCACACGAACCTTGTGGGCTTGGTGGGCTTTTGCGAAGAAGTTGGGGCAAAAGGGGCAAAAGTATTGGTTTACGAATACGTACCCAATGGTTCTCTACTTGAATACATAGTGGGAAGGAGAGGGAAGACCTTAACTTGGAGGCAAAGAGTAAACCTAGCGATTGGAGCCGCTAAAGGCATAGCGCATCTCCATGAAGGCGTCCAGCCGAGCATAATCCACAGGGATATCAAACCAAGCAACATATTAGTGGGGGACAGGTTTGAGGCCAAGGTTTCGGATTTCGGGTTAGTGAAGTCGGGACCCGTAGGGGACGAGTCGCATGTTAGTAGCCAAATCAAAGGAACTCCAGGGTACTTAGATCCGGCTTACTGTTCAAGCTTTCACGTAACTCCGTTTAGTGATGTATATAGCTTTGGAGTTATACTGTTGCAACTTGTTGCTGCCAGACCCGCAGTCGATAGAAATCGAAACGGTTCTAGTTATCATATAATTGAGTGGGCAAGGCCTTGCTTAGAACGAGGTAACGTTGAGGATATATTAGATGTCAATTTGCTAACAGAACCATGCAACATGGAGATGATGCTGAAGATGGGACAATTAGGTCTTCGATGTGTTGTGAAAATACCGAAAAAGCGCCCCACGATGACTCAGGTGTGGCAAGAACTAGAGGAAGCCCTTTATTCGACAGATAATTCCATCCACAAGCAGCCTCGTAGATCAATCGGGGGCTCTCGTAGTCGTAGATCAATAGATTATGATAACTCCCAAAGCTTCGTGAGCGTAGATGGCGTGGGATTGCAGAGGTTCCATGTAGAGATGGATAGCATATCATTTCAGAGTACAAGCATGATGTGCTTAGAGAACAACAGTATCAGCATCGATGTCGATAAGAACAATTTAGGAGGAATAAGCGAGGAAACAAGTACAGATTATGAGACTAGCTTAACGCGTGATTAG 1254 0.4585 MEGERMRRRSFGVLRQRWMRRVGGLKSKKMHLRRFQLEELEKATKNFSQDCLIGSGAFGNVYKGTFDEEGLLAIKRAHDDSYQSVQEFRNEVELISRVKHTNLVGLVGFCEEVGAKGAKVLVYEYVPNGSLLEYIVGRRGKTLTWRQRVNLAIGAAKGIAHLHEGVQPSIIHRDIKPSNILVGDRFEAKVSDFGLVKSGPVGDESHVSSQIKGTPGYLDPAYCSSFHVTPFSDVYSFGVILLQLVAARPAVDRNRNGSSYHIIEWARPCLERGNVEDILDVNLLTEPCNMEMMLKMGQLGLRCVVKIPKKRPTMTQVWQELEEALYSTDNSIHKQPRRSIGGSRSRRSIDYDNSQSFVSVDGVGLQRFHVEMDSISFQSTSMMCLENNSISIDVDKNNLGGISEETSTDYETSLTRD* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02276 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Eupl03g02276 417 MobiDBLite consensus disorder prediction 396 417 - -
Eupl03g02276 417 SUPERFAMILY Protein kinase-like (PK-like) 28 322 IPR011009 -
Eupl03g02276 417 SMART serkin_6 47 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02276 417 Gene3D Transferase(Phosphotransferase) domain 1 126 342 - -
Eupl03g02276 417 ProSiteProfiles Protein kinase domain profile. 47 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02276 417 Gene3D Phosphorylase Kinase; domain 1 13 125 - -
Eupl03g02276 417 Pfam Protein kinase domain 50 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02276 417 PANTHER OS01G0750732 PROTEIN 31 342 - -
Eupl03g02276 417 CDD STKc_IRAK 53 323 - -
Eupl03g02276 417 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Eupl03g02276 417 FunFam Putative LRR receptor-like serine/threonine-protein kinase 20 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02276 Eupl-Chr3 53695486 53698696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02276 21 335 Receptor kinase-like Gene Family AT1G30570 40.952 6.34e-73 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl03g02276 Pkinase 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02276 - - twl:120014789 624.394