Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02233 ATGACAGTTGAAGAGGGTGTTACAGAGATGGAGAAGAAGAAGATTGTGTTGGTTGGGATCCGTTTTGATGCAAATGGTAGAGAGCTGCTCAATTGGGCTATTGTTAAAGTCGCCGAACCAGGAGACCATGTAGTTGCAGTTCATGTTTGTCAAAATTCCAGTGAAGATCCCAGTTCAAAGGAGGACCCATCATTGGATGGTTATTTGGAAGTTTACAAAGGCTTATGTAATATAAAGCAGGTTGATCTCACTGGTCAGATTTCTCGTGGAAGTTCCGTTCGAAATGTATTAGTGAAAGAGGCAAAGCTCTGTGAGGCCATGACTGTCATTGTCGGAATAAGCAAGATAAATGCACTTGGGGGTTGTGTTTCTGTGGCCAAGTATTGTGCCAAGAGGTTACCGCCGACTACTACAGTACTAGCTATCCACAATGGGAAGGTTGTCTTCAAAAGAGGTTCCATTAACCAGCCACCAGGAGATCCAACGCGGAGTCTTTACTCAATTCAAGTTTCCAGTCTCAAAGAAAACCAGCCTAGTTTTCGAGTTTCAGAGACATCTGATGTTGAAAATTTCAGTCCCAAGGTGGTTCAGAATTTAGAAGATGGATCAAGAGATGGTGGGGACGACACGAAACATGACAAATTCAGCTTTGTTCACGAATACAGGGATGAAGTTTCTTCAAGTTCGATTTCTGGTGGTGACGACACAAAACACGACAATTTCAGCCTTGGTCATGAATACATGGACAAAGTTTCTTCAAGCTCAATTTCTGTTCTTACAAAAGAGCTACAAGAACCAAGACCCGGTTGGCCCCTTCTTCGAAGAGCAGCTTCGGCAACTCCCGAAATTTTGAAAGAATCGGAAGCTAGAAAAATGTCTGTGGTTCAATGGGTAATGACTCTACCAAATAGGACTCCCCCTCCGACTCCGCAAACCCAGATTAGCTTGGATAAAACAGAAATTTCTTTTGAAAGAGAGCATGGGAATTACTTGTCTCTCTGGGGAGAACTACCCAAAGAGTTGGAGCTTCTCCTTAGAACAAACTCCTCTTGCTGTAGGCGATTCAGCCATAAGGAGATCAAGAGTTCAACTTCTCAGTTCTCTTCAGAGAATCTGATTGGGAAGGGAGGGTGTAGCCGTGTATACAAGGGTTATCTTCCTGATGGCGAGCCGGTGGCAGTAAAGATTTTGAAACCGTCCAAGGAAGCGTGGAAGGATTTTGTCTTGGAAGTTAATATCACCTTGGCCTTGAAGCACAAACACATTACACCTCTGATTGGGGTATGCATTGAAGACAGTGATCTTATCTCAGTTTATGACTTCTTGTCGAAAGGAAGTTTAGAGGAAAACCTTCATGGTAATATAGAGAAATCTGTATTGTCATGGGAGGTGAGGTTTAAGGTTGCTGTTGGAGTTGCTGAGGCCATAAATTACTTGCACAAGGAATGTTCTCAGCCTGTCATTCATAGAGATGTCAAGTCTTCGAATATTCTTCTCTCCGATGATTTTGAACCACAGTTAACTGATTTCGGTCTTGCTATATGGGCACCGACAAGTTCGTCTTATGAGATACACAGTGATGTAGTAGGGACTTTCGGGTATCTTGCTCCTGAATATTTCATGTATGGGAAGGTTAGCAACAAGACAGATGTATACTCCTTTGGTGTGGTTCTCCTTGAACTGTTATCAGGAAGAAAGCCGATCGGCACTGAGACTCCCAAGGGTCAAGAGAGCTTGGTCATGTGGGCAAAACCAATATTAGAGAGTGGCGACATGATGGCAATACTGGATCCAAACCTGGCTGGAAACTTCGACAAGGTTCAAATGCGAAGAATGGTTCTGGCTGCATCCCTTTGCATCACAAGAACAGCTCGACTCCGGCCCCAAATGAGTGAGATATTGAAGCTTTTACAAGGGGAGAAGGATGTCGAGGAGTGGGTGAACACCCATTTCAATGATCCAAAGGAGTGTGATAACCAGGATGATGATGAAGCTTATCCAGATTCTAGTGTGGAATCACATCTAGGTCTTGCTTTGCTTGATGTGGATGATGATACTACATCGCTAAGCAGTGTAGAGCAAAACCACCATCATACCTTGGAGGACTACTTTAAAGGGCGATGGAGCCGATCATCAAGCTTCGACTAG 2148 0.4381 MTVEEGVTEMEKKKIVLVGIRFDANGRELLNWAIVKVAEPGDHVVAVHVCQNSSEDPSSKEDPSLDGYLEVYKGLCNIKQVDLTGQISRGSSVRNVLVKEAKLCEAMTVIVGISKINALGGCVSVAKYCAKRLPPTTTVLAIHNGKVVFKRGSINQPPGDPTRSLYSIQVSSLKENQPSFRVSETSDVENFSPKVVQNLEDGSRDGGDDTKHDKFSFVHEYRDEVSSSSISGGDDTKHDNFSLGHEYMDKVSSSSISVLTKELQEPRPGWPLLRRAASATPEILKESEARKMSVVQWVMTLPNRTPPPTPQTQISLDKTEISFEREHGNYLSLWGELPKELELLLRTNSSCCRRFSHKEIKSSTSQFSSENLIGKGGCSRVYKGYLPDGEPVAVKILKPSKEAWKDFVLEVNITLALKHKHITPLIGVCIEDSDLISVYDFLSKGSLEENLHGNIEKSVLSWEVRFKVAVGVAEAINYLHKECSQPVIHRDVKSSNILLSDDFEPQLTDFGLAIWAPTSSSYEIHSDVVGTFGYLAPEYFMYGKVSNKTDVYSFGVVLLELLSGRKPIGTETPKGQESLVMWAKPILESGDMMAILDPNLAGNFDKVQMRRMVLAASLCITRTARLRPQMSEILKLLQGEKDVEEWVNTHFNDPKECDNQDDDEAYPDSSVESHLGLALLDVDDDTTSLSSVEQNHHHTLEDYFKGRWSRSSSFD* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02233 715 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 141 - -
Eupl03g02233 715 ProSiteProfiles Protein kinase domain profile. 367 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02233 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Eupl03g02233 715 Pfam Protein kinase domain 368 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02233 715 SUPERFAMILY Protein kinase-like (PK-like) 348 637 IPR011009 -
Eupl03g02233 715 PANTHER OS08G0249100 PROTEIN 239 658 IPR046958 -
Eupl03g02233 715 Gene3D Phosphorylase Kinase; domain 1 337 441 - -
Eupl03g02233 715 Gene3D Transferase(Phosphotransferase) domain 1 442 661 - -
Eupl03g02233 715 Pfam Universal stress protein family 14 134 IPR006016 -
Eupl03g02233 715 SMART serkin_6 367 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g02233 715 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 336 441 - -
Eupl03g02233 715 CDD USP_Like 16 134 - -
Eupl03g02233 715 Gene3D HUPs 2 142 IPR014729 -
Eupl03g02233 715 FunFam Putative receptor-like serine/threonine-protein kinase 442 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02233 Eupl-Chr3 52951971 52956290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02233 355 633 Trihelix Transcription Factor Family AT1G68690 45.775 3.29e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl03g02233 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02233 - - vvi:100245139 816.224