Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02222 ATGGTAGAATTTTCTCTTGATAGTGAGCCATTGACTGATGACGAAGGAAATGAGGATGAGATGGAAAGAGATTGTGCCGTTACAGAGTCTGAGGGTCAGAATGGTGCACATCAAGGAAATAAGGAACCCTTGCCACCTGTTGTGGGGATGGAATTTGAGTCTTATGATGATGCTTATAAGTTTTATAATTCCTATGCTAAGGAATTGGGTTTTGGCATTAGAGTAAGACATTCATGGTTTAGAAAAAAGAGTAAAGAAAAGTACCACGTGGTACTTTGTTGTAGTAGTGAGGGCTTTAAAAGAAAAAGAGAAGCATATCGTTTACGACCAGAAACAAGAACCGGTTGTCCAGCAATGATGAGGATTAGGTTAATGGAATCTAAAAGATGGAAAGTCACAGAGGCTAGGCTTGAACACAACCATTTACGATTCTTTAAATCACATAAGATCATGGGTATTGGAACCAAAAGAAAATTGCAGTTAGATTGTGATGCAGGAGCACGAACAAATAAGTTGTACCAAACGCTTGTTACGAATGCAGGAGGTTATGAAAACTTAACCTTTGTGGGAAGTGATGTTGTGAATTATGTTTATCAGTATAAGCGATTGAAGCTTAAAGAAGGAGATGCACAGGCCACTTATAATTTTTTTTGTCGCATGCAGTTGAAGAGTCCGAACTTCTTTTACTTGACGGATCTCAATGATGAAGGGCGTTTAGGGAATGTGTTCTGGGCTGATGGCAGGTCTAGGGCTGCATATGGTTACTTTGGCGATGTAGTTGCTTTTGACACTACATACGTGAACAAATATGACTTGCCATTTGTTCCATTTGTTGGAGTTAATCACCATGGGCAATCTGTGTTGCTGGGTTGTGGATTGCTTGCTGATGAGACAACCGAGTCGTTTCTTTGGTTGTTCAAGGCATGGCTTACATGTATGTTAGGACGCCCTCCATCTGTCATAATCACTGACCATTGCAAGGCCATGCAAAAAGCAATTGCTGAGGTATTCCCTAGAGCCCATCATTGTCTTTGTGTGTGGCACATCATGCAAAAATTTCCAGAGCAATTGAAAGGATTACGTGACTACGAAGCAGTTAAAAGGGCATTAAATAAAGCAGTTTATGACTCTTTGAGAGTGGATGAATTTGAAACAGCATGGGAGGATATGATTCAACGTTATGGACTTAGGGATCATGAATGGCTTCAGACATTGTATGATGATCGACAACGATGGGTTCCCGTTTTCTTAAAGGACATATGTTTTGCAGGAATGTTTGCTACCCAACAGGGGGAGAGCATGGATGCGTTTTTTGATGGTTATGTGCATAATCAGACTTCTTTGAAGCAGTTTTTCAGTCAGTACGAATTAGTTCTACAAAAGAAGCATCAGCAAGAAGCTAGGGCAGATTATGAGTCAAGAAATTCAGACGTGGTGTTGAAAACAAAATGCTGTTTTGAATTACAGCTCTCCAAAGTGTACACAAAAGATATATTTATGAAGTTCCAATATGAGGTGGAGGAAATGTATTCGTGTTTTAACACAACACAAGTAAATGTTGACGGGCCAATCATAACATACAAAGTCAAAGAACGTGTTGGGGCTGAGGGAAATTATAGGGAGATTAGGGACTTTGAAGTTTTTTACAATACCGCTAAAGTTGAAGTTCATTGCATTTGCGGTTGGTTTAACTTTAAAGGTTGTTTATGTAGACACGCACTGAGCGTCCTTAACCATAATGGCGTGGAGGAGATCCCATCTCAGTACATTCTGTCACGTTGGAGAAAGGATTTTAAGCGCAGTTATGTTCCGGATCATGGCTCCAATTATGTTAATGTTAATAACTCTGTACAACGTTATGATCATTTATGCAAACGTGCCTTCCAAGTTGTGGAGGAGGGGATGATATCTCATGAACATTACAAGGTTGCTTTGCAAGCATTTGAGGAGTCGTTGAATAAGGTTCGTCTTGTAGAGGACATTGAAGCGAATAAGATCACTTCAATAACACAACCAAGTCTAACTGAAAATTTCATGGTGCAAGATTCTTCACAAGTAGAACAGGTAGGTCACGCAAAGCAAAATTCATTGCGATCTTTCATAGAAAAAATCTGTAGAACCACTCGAAAAAAGATTATTGATCAAAAAAGGAAAAGAAAAGATGCTCAAGGAGAAGAAGAGGTTGTCACCCAACGCTTACGGCCCATTGCCCCAAGGCCCCCAACAGCACCAAATCTTGGCAACCTGGTTAGCAGGCAACCGTTTAGCAGTTTTGGACAGTACAACTCAGAGCCAATGATACAGAAGAAGTCACGAATAGGAGCTTTCCAGTCACTAATGGGACAATTTTCACCTACCCAACCGAGTCTCCATAGCCAGGTTGGCTTTGAATCCCTGCAAGGATCTTCAGTGTCTTCCTCCACATCACGTGTTAGGATTGCAAGCACATCCGAACAACAATTGCATAAGCATCCCTCGACATAG 2484 0.4066 MVEFSLDSEPLTDDEGNEDEMERDCAVTESEGQNGAHQGNKEPLPPVVGMEFESYDDAYKFYNSYAKELGFGIRVRHSWFRKKSKEKYHVVLCCSSEGFKRKREAYRLRPETRTGCPAMMRIRLMESKRWKVTEARLEHNHLRFFKSHKIMGIGTKRKLQLDCDAGARTNKLYQTLVTNAGGYENLTFVGSDVVNYVYQYKRLKLKEGDAQATYNFFCRMQLKSPNFFYLTDLNDEGRLGNVFWADGRSRAAYGYFGDVVAFDTTYVNKYDLPFVPFVGVNHHGQSVLLGCGLLADETTESFLWLFKAWLTCMLGRPPSVIITDHCKAMQKAIAEVFPRAHHCLCVWHIMQKFPEQLKGLRDYEAVKRALNKAVYDSLRVDEFETAWEDMIQRYGLRDHEWLQTLYDDRQRWVPVFLKDICFAGMFATQQGESMDAFFDGYVHNQTSLKQFFSQYELVLQKKHQQEARADYESRNSDVVLKTKCCFELQLSKVYTKDIFMKFQYEVEEMYSCFNTTQVNVDGPIITYKVKERVGAEGNYREIRDFEVFYNTAKVEVHCICGWFNFKGCLCRHALSVLNHNGVEEIPSQYILSRWRKDFKRSYVPDHGSNYVNVNNSVQRYDHLCKRAFQVVEEGMISHEHYKVALQAFEESLNKVRLVEDIEANKITSITQPSLTENFMVQDSSQVEQVGHAKQNSLRSFIEKICRTTRKKIIDQKRKRKDAQGEEEVVTQRLRPIAPRPPTAPNLGNLVSRQPFSSFGQYNSEPMIQKKSRIGAFQSLMGQFSPTQPSLHSQVGFESLQGSSVSSSTSRVRIASTSEQQLHKHPST* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02222 827 MobiDBLite consensus disorder prediction 8 25 - -
Eupl03g02222 827 Pfam MULE transposase domain 259 352 IPR018289 -
Eupl03g02222 827 SMART 26again6 556 583 IPR006564 GO:0008270
Eupl03g02222 827 ProSiteProfiles Zinc finger SWIM-type profile. 545 581 IPR007527 GO:0008270
Eupl03g02222 827 MobiDBLite consensus disorder prediction 784 827 - -
Eupl03g02222 827 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 656 IPR031052 GO:0006355
Eupl03g02222 827 MobiDBLite consensus disorder prediction 1 45 - -
Eupl03g02222 827 Pfam FAR1 DNA-binding domain 60 141 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02222 Eupl-Chr3 52821448 52824517 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl03g02222 MULE 1.4e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02222 - K17604 nnu:104592503 908.672