LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl03g02213	ATGGCGTCACCTGTAGTTGATAAAGAGTACCTCGAGGAAATCGAAAAGGCTCGTCGTGATCTTCGTGCTCTCATTTCCAGCAAGCACTGCGCACCCATCATGCTTCGTTTGGCGTGGCACGATGCAGGCACTTACGATGTTAAAACAAACACAGGTGGTCCTAATGGATCAATCAGATCTAAGGAAGAGTTGAAACATAATGCAAATAAGGGCTTGCAAATCGCAATTGATTTTTGTGAAGAAGTGAAGAAAAAGCATCCAAAGATTACATATGCAGACCTTTATCAGCTTGCTGGGGTTGTTGCAGTAGAGGTAACTGGTGGGCCCACCATAGACTTTGTTCCCGGTAGAAAGGATTCAATGGATTCTCCTCCAGAAGGACGAATTCCGGATGCTAAACAAGGTGTTGAACATTTGAAGAGCATCTTTTATCGGATGGGTCTATCTGACAAGGATATTGTGGCATTATCCGGTGCCCACACACTGGGAAGGGCACATCGAGAGAGGTCAGGCTTTGATGGACCTTGGACTAACAAGCCTCTCAAGTTTGATAACTCCTACTTCTTGGAGCTGCTAAAAGGGGAGACGGTGGGTTTATTGAAACTTCCCACGGACAAGGCTCTATTAGAGGATCCTGAGTTCCGGCGTTATGTTGATCTCTATGCCAAGGATGAAGATGCATTCTTCATGGACTATGCAGAATCACACAAGAAACTTTCTGAACTTGGATTTACGCCAAGCTGCTCGTGCTCCAATGTTAACGTAAAGAACCACACCATATTGCTACAAACTGCGGTCGGAGTTGCAGTTGCTGTAGCTGTGGTGATCCTGAGTTTCTTCTATGACCTCACTGAAGCTTCAAGTAAATAG	870	0.4529	MASPVVDKEYLEEIEKARRDLRALISSKHCAPIMLRLAWHDAGTYDVKTNTGGPNGSIRSKEELKHNANKGLQIAIDFCEEVKKKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSMDSPPEGRIPDAKQGVEHLKSIFYRMGLSDKDIVALSGAHTLGRAHRERSGFDGPWTNKPLKFDNSYFLELLKGETVGLLKLPTDKALLEDPEFRRYVDLYAKDEDAFFMDYAESHKKLSELGFTPSCSCSNVNVKNHTILLQTAVGVAVAVAVVILSFFYDLTEASSK*	290

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl03g02213	289	ProSiteProfiles	Plant heme peroxidase family profile.	31	254	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Eupl03g02213	289	FunFam	Cytosolic ascorbate peroxidase	17	134	-	-
	Eupl03g02213	289	Pfam	Peroxidase	18	224	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Eupl03g02213	289	Gene3D	-	17	243	-	-
	Eupl03g02213	289	PRINTS	Haem peroxidase superfamily signature	31	45	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Eupl03g02213	289	PRINTS	Haem peroxidase superfamily signature	89	106	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Eupl03g02213	289	PRINTS	Haem peroxidase superfamily signature	152	167	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Eupl03g02213	289	PRINTS	Haem peroxidase superfamily signature	107	119	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Eupl03g02213	289	PRINTS	Haem peroxidase superfamily signature	176	191	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Eupl03g02213	289	PRINTS	Plant ascorbate peroxidase signature	63	87	IPR002207	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl03g02213	Eupl-Chr3	52705025	52710495	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl03g02213	89	243	Peroxidase	AT4G17690	32.812	3.33e-20	87.0

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl03g02213	K00434		-	tcc:18607557	457.988

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