Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g02211 ATGGCGGAGAGAATTCCTTCAGTGAGTTTCGTGCCTCCACCGACTCCGGTGACGTCCAGAAGGTTGCGGCCGAGAAGGCCTTTTAACAGATTATGTGGTTTCATAGGGAGCAATAACCAGGCCTCGCATCGTCGAAGAATTCTTCATGGGGAGGTTGAAGAAGAGGAATTTCAGTATGCAAGTACCCATTGTCTCTCATCCTATTATAGTGTCTTCGTCGCCCGACTCGCTATCATGGTCATGCTAGCAATTTTAATTGGGATGCTAACCATACTGACATGGCATTTTACAAGGGTCTACACAACAAAATCAATAAACAGCTTAGCATTTGGCCTCCGTTTTGAACTTCTACAACGTCCCATATTGCGGATGTGGAACATCTTGAATTCCACCGTCGAAATAACCATGGCGCAGGTTAAGCTTTCTGAATATGTGATTAGACGGTATGATAAGCCGATGGCCCAGGCCCAAGAAGCACAAATTTATGAAGTAATGAGGGATATAACTTGGGCCCTCTTTGCAAGCCGAAGAGCTCTCAATGCAATAACTATAAATTACAGGAACGGTTTTGTCCAAGCTTTTCATAGAGATCACAGGAGTAACAACACATTCTACATCTACTCTGACCTTGTAAACTCTTCAGTTACTGGGACCCACAAAACTGATGTGCTATCATCACATCAAGGATGGACTGATCAATCTGTATATGGTAACCTCTCCGCAATTTGGTATCGTGAACCACTTGATCCTATGACTGGTGAGAAGATAGGGGAACCGAGACCAATCCCACCGGATGATCTAATCAATATTGCGGGTATATCAGAAGTACCGGATGGTGCAGCTTCATGGCATGTTACAGTAAGCAAATTTACAAATTCACCATTGTTGTCAGCAGCATTACCAGTCTGGGACTCTTCCAATAGAAGTATAGTGGCAGTTGTGGGTGTTACTACACCACTCTATAGTGTGGGTCAGCTGATGAGAGAACTGGTAGTATTACACAGTGGGTACTTGTACTTGACTTCTCAGGAGGGCTATATACTTGCCACATCAACAGATGCCCCGCTTTTGAGGAATTCAACTAGTGGGCTAAAGCTTATGAAGGCTGTTGATTCAGATGATCACATAATACAATTGGGAGCCAAGTGGTTGGAGAGCCTGTACGGAGACAAGTTTTCTCCAAATCAGGAGGTTCATGCTGAGAATGTCAGGCTTGGACACCAACAATATTACATTGATTCCTTCTTCCTAAATCTAAAGAGACTTCCTCTGGTGGGGGTTATCATCATTCCAAGGAAATATATAATGGGGAAGGTAGATCAGAGAGCCCTCACGACGTTGGTTATACTGATATCAGCATCTGTTTGTATTCTAGTCATTGGCTGTGTTTGCATTTTGATATTGACAAGTGGAGTTTCAAAGGAAATGAAACTTAGAGCAGAACTGATAAGCCATCTTGATGCAAGAAGAAGAGCAGAGGCATCAAGCAACTACAAAAGCCAGTTCTTAGCAAACATGAGTCACGAGTTGCGAACACCTATGGCTGCAGTGATTGGGTTGCTGGACATTCTTATATGTGATAATTGTCTGACAAATGAGCAATATGCAACAGTTACACAGATTCGTAAATGCTCAACTGCTCTACTTCGGCTTCTTAATAACATTTTGGACCTTAGTAAGGTTGAATCTGGAAAACTAGTACTAGAAGAAGCTGAATTTGACTTGGGGCGGGAACTTGAAGGACTGGTGGATATGTTATCTGTGCAATGTATTAACCACAATGTGGAGATTGTTCTAGATCTCTCTGATGATATGCCAAAATTAGTTCAGGGAGACTCTGCCAGAGTGGTTCAAATATTTGCAAATCTCATTAGCAATTCTATCAAGTTTACATCGTCGGGCCATATTATTTTGCGGGGATGGTGCGAGAGCTCCAATACTCCTAGTAACACCAAGAGGTTGCCCCTTGATCAGAAGGAATCACAAACTGCACTCAAAACAAAATCAAAGCAACATGGACACCGTGCAAAGAGAACCTTCAAGAAAAATAACAGGATTATTCTTTGGTTTGAAGTTGACGACACTGGCTGTGGGATTGAGCCAAGCAAATGGGAATCTGTATTTGAAAGTTTTGAGCAAGCTGACCCCTCGACAACTCGAACGCATGGTGGGACTGGTCTTGGCCTATGCATAGTGCGCACCTTGGTAAACAAGATGGGTGGAGAAATTAAAGTTGTGAAGAAGGATGGTCCAGGGACTCTGATGCAACTCTACTTGGTTCTCAGTACACCTGTAGATGGCATCGGACAGAATGGTCAAATAGAATTCTCCAAACATAGCTTAATGGTGTTGCTCGCACTTAATGGTACTATGTGTAGATCTATCATGTCCCACTGGTTAAAGAAACATGGGGTTTGCACCTGGGAAGCATCCGAGTGGAATGAAATAGCCCAAATACTTCAGGAAGTCTTTCAAGGTGGCATTAGAAAGCCCAAGAGTGGGCTCAAAACAGAATGTTCAACTAGTGAAATTTTGAGACCTGATCAAGAGTTCCACATCCAAAACATGAGGGCTTCAAAATTTGTCATAGTATTTGATATAGGACTACTTGACTTAAGCACGGATATATGGAAAGAGCAGGTTAAGTTCCTCGACAAATATCGCGGGAAGGCAAACTTTGCATGGATACTAAACCATGACACCTGCAATGCCATTAAGATGGAGCTTCGAAGGAAAGGACATTTATTGATGGTCAACAAACCAATGTACAAAGCAAAAATAATTCAGATTTTGGAATCCATAGTATACGAAGTTGATTGCCATGAAGTTGGTCCCATTCACTATGAAGTTGCAAGCTCAGATGATTCTGATACATCCGGAGTACGAAGTTTTAATTCAAGAAGTGTTGCATTTCATGTTGGAGAAAAGCCAGGAGGAAGAATTACAACACCTCATCCGGTACATTACAATGGGTACAACCAAATCTTAGTCGAGCTCAGTCAGGTTTGTTCTAAAGAAAAGAATTTGAAGCCAGAATATCCATGTCAGATCAGTGAACATCTAATGATCAGCAATGGTCAGAAAGAAAAAGATCATGTAGATTCAAATAAGGTTATTCCCAGGCAAAAGTCTCTTCAAGGACTGTGTATACTTCTGGCAGAAGATACACCAGTACTCCAGAGGGTCGCAACAATAATGCTGGAAAAAATGGGGGCTACAGTCGTGGTTGTAGGAGATGGAGTGCAAGCAGTAAATGCTCTGAAATGCATGTTTAGTGCAGAGGCCAAATCACCCTTGCGAGATGGCGAAACCAGATCTCAAACACAACAACTCCAGGAATTTCCACCATTTGATCTGATCCTGATGGATTGTCAAATGCCAAAGATGGATGGTTATGAAGCAACAAAAGCAATCAGGAAATCTGAGACGGGGACTGGCTCACATATCCCCATTGTTGCACTGACGGCCCATGCAATGTCCTCAGATGAAGCCAAATGCTTGGAGGTGGGGATGGATGCCTACCTAACAAAGCCTATTGACTGCAAGCTCATGGTGTCCACCATTCTTTCGCTAACTCGGAGAACAACCTAA 3591 0.4272 MAERIPSVSFVPPPTPVTSRRLRPRRPFNRLCGFIGSNNQASHRRRILHGEVEEEEFQYASTHCLSSYYSVFVARLAIMVMLAILIGMLTILTWHFTRVYTTKSINSLAFGLRFELLQRPILRMWNILNSTVEITMAQVKLSEYVIRRYDKPMAQAQEAQIYEVMRDITWALFASRRALNAITINYRNGFVQAFHRDHRSNNTFYIYSDLVNSSVTGTHKTDVLSSHQGWTDQSVYGNLSAIWYREPLDPMTGEKIGEPRPIPPDDLINIAGISEVPDGAASWHVTVSKFTNSPLLSAALPVWDSSNRSIVAVVGVTTPLYSVGQLMRELVVLHSGYLYLTSQEGYILATSTDAPLLRNSTSGLKLMKAVDSDDHIIQLGAKWLESLYGDKFSPNQEVHAENVRLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDQRALTTLVILISASVCILVIGCVCILILTSGVSKEMKLRAELISHLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILICDNCLTNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMLSVQCINHNVEIVLDLSDDMPKLVQGDSARVVQIFANLISNSIKFTSSGHIILRGWCESSNTPSNTKRLPLDQKESQTALKTKSKQHGHRAKRTFKKNNRIILWFEVDDTGCGIEPSKWESVFESFEQADPSTTRTHGGTGLGLCIVRTLVNKMGGEIKVVKKDGPGTLMQLYLVLSTPVDGIGQNGQIEFSKHSLMVLLALNGTMCRSIMSHWLKKHGVCTWEASEWNEIAQILQEVFQGGIRKPKSGLKTECSTSEILRPDQEFHIQNMRASKFVIVFDIGLLDLSTDIWKEQVKFLDKYRGKANFAWILNHDTCNAIKMELRRKGHLLMVNKPMYKAKIIQILESIVYEVDCHEVGPIHYEVASSDDSDTSGVRSFNSRSVAFHVGEKPGGRITTPHPVHYNGYNQILVELSQVCSKEKNLKPEYPCQISEHLMISNGQKEKDHVDSNKVIPRQKSLQGLCILLAEDTPVLQRVATIMLEKMGATVVVVGDGVQAVNALKCMFSAEAKSPLRDGETRSQTQQLQEFPPFDLILMDCQMPKMDGYEATKAIRKSETGTGSHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDCKLMVSTILSLTRRTT* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g02211 1196 SUPERFAMILY CheY-like 1047 1194 IPR011006 -
Eupl03g02211 1196 SMART HKATPase_4 611 763 IPR003594 -
Eupl03g02211 1196 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 486 565 IPR036097 GO:0000155|GO:0007165
Eupl03g02211 1196 Gene3D - 486 565 - -
Eupl03g02211 1196 CDD HisKA 499 560 IPR003661 GO:0000155|GO:0007165
Eupl03g02211 1196 Gene3D PAS domain 294 442 - -
Eupl03g02211 1196 Gene3D - 566 764 IPR036890 -
Eupl03g02211 1196 ProSiteProfiles Histidine kinase domain profile. 505 763 IPR005467 -
Eupl03g02211 1196 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 553 759 IPR036890 -
Eupl03g02211 1196 SMART HisKA_10 498 564 IPR003661 GO:0000155|GO:0007165
Eupl03g02211 1196 ProSiteProfiles Response regulatory domain profile. 1049 1192 IPR001789 GO:0000160
Eupl03g02211 1196 SMART REC_2 1048 1188 IPR001789 GO:0000160
Eupl03g02211 1196 Pfam His Kinase A (phospho-acceptor) domain 499 564 IPR003661 GO:0000155|GO:0007165
Eupl03g02211 1196 MobiDBLite consensus disorder prediction 646 676 - -
Eupl03g02211 1196 Pfam Response regulator receiver domain 1050 1186 IPR001789 GO:0000160
Eupl03g02211 1196 FunFam Histidine kinase 1-like protein 486 565 - -
Eupl03g02211 1196 PANTHER TWO-COMPONENT HISTIDINE KINASE 57 767 - -
Eupl03g02211 1196 MobiDBLite consensus disorder prediction 646 662 - -
Eupl03g02211 1196 PRINTS Bacterial sensor protein C-terminal signature 706 716 IPR004358 GO:0016310|GO:0016772
Eupl03g02211 1196 PRINTS Bacterial sensor protein C-terminal signature 688 702 IPR004358 GO:0016310|GO:0016772
Eupl03g02211 1196 PRINTS Bacterial sensor protein C-terminal signature 723 741 IPR004358 GO:0016310|GO:0016772
Eupl03g02211 1196 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 761 IPR003594 -
Eupl03g02211 1196 CDD REC_hyHK_CKI1_RcsC-like 1050 1188 - -
Eupl03g02211 1196 Gene3D - 1026 1193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g02211 Eupl-Chr3 52673281 52684848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g02211 13 1193 Histidine Kinase Gene Family AT2G17820 62.644 0.0 1528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl03g02211 HATPase_c 2e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g02211 - - nnu:104604241 1692.17